Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm10773-201ENSMUST00000218071 3935 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col8a1Q00780 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col8a1Q00780 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm28112-201ENSMUST00000190898 1875 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm38029-201ENSMUST00000192669 2090 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm43533-201ENSMUST00000202933 2936 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm42820-201ENSMUST00000200084 3063 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 AC159193.3-201ENSMUST00000221902 2622 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC5.86□□□□□ -1.47
Col8a1Q00780 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC5.86□□□□□ -1.47
Col8a1Q00780 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 CT573019.1-201ENSMUST00000227762 1689 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm18491-201ENSMUST00000192492 1594 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Col8a1Q00780 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm34294-201ENSMUST00000191912 4263 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col8a1Q00780 Mir674-201ENSMUST00000102421 100 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Mir582-201ENSMUST00000103758 81 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm25724-201ENSMUST00000104531 117 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col8a1Q00780 Snord88a-201ENSMUST00000116723 90 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm15616-201ENSMUST00000118662 375 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm12090-201ENSMUST00000118692 758 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm11533-201ENSMUST00000120287 477 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm11879-201ENSMUST00000121885 702 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm12103-201ENSMUST00000121892 362 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm25052-201ENSMUST00000122661 158 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm24198-201ENSMUST00000157812 108 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col8a1Q00780 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col8a1Q00780 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col8a1Q00780 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms