Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CiitaP79621 AC125328.1-201ENSMUST00000226812 2265 ntBASIC6.57□□□□□ -1.36
CiitaP79621 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CiitaP79621 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CiitaP79621 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
CiitaP79621 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.57□□□□□ -1.36
CiitaP79621 Gm44043-201ENSMUST00000203426 3253 ntBASIC6.56□□□□□ -1.36
CiitaP79621 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CiitaP79621 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CiitaP79621 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CiitaP79621 Gm8401-201ENSMUST00000120248 1739 ntBASIC6.56□□□□□ -1.36
CiitaP79621 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CiitaP79621 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CiitaP79621 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CiitaP79621 Gm8872-201ENSMUST00000197475 1341 ntBASIC6.56□□□□□ -1.36
CiitaP79621 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CiitaP79621 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CiitaP79621 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CiitaP79621 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.56□□□□□ -1.36
CiitaP79621 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CiitaP79621 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
CiitaP79621 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.56□□□□□ -1.36
CiitaP79621 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC6.56□□□□□ -1.36
CiitaP79621 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
CiitaP79621 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CiitaP79621 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CiitaP79621 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CiitaP79621 Gm25345-201ENSMUST00000104505 133 ntBASIC6.56□□□□□ -1.36
CiitaP79621 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
CiitaP79621 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CiitaP79621 Gm13770-201ENSMUST00000117149 305 ntBASIC6.56□□□□□ -1.36
CiitaP79621 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CiitaP79621 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CiitaP79621 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CiitaP79621 Mirt2-201ENSMUST00000175179 285 ntBASIC6.56□□□□□ -1.36
CiitaP79621 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CiitaP79621 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CiitaP79621 Mir7685-201ENSMUST00000183555 62 ntBASIC6.56□□□□□ -1.36
CiitaP79621 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC6.56□□□□□ -1.36
CiitaP79621 Gm38097-201ENSMUST00000192936 439 ntBASIC6.56□□□□□ -1.36
CiitaP79621 Gm36939-201ENSMUST00000194889 439 ntBASIC6.56□□□□□ -1.36
CiitaP79621 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC6.56□□□□□ -1.36
CiitaP79621 Gm42753-201ENSMUST00000196718 1268 ntBASIC6.56□□□□□ -1.36
CiitaP79621 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
CiitaP79621 Gm46223-201ENSMUST00000215196 675 ntBASIC6.56□□□□□ -1.36
CiitaP79621 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CiitaP79621 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CiitaP79621 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
CiitaP79621 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CiitaP79621 Gm43258-201ENSMUST00000200312 1950 ntBASIC6.56□□□□□ -1.36
CiitaP79621 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CiitaP79621 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CiitaP79621 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.56□□□□□ -1.36
CiitaP79621 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.56□□□□□ -1.36
CiitaP79621 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
CiitaP79621 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CiitaP79621 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CiitaP79621 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CiitaP79621 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
CiitaP79621 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CiitaP79621 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CiitaP79621 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CiitaP79621 AC169985.1-201ENSMUST00000223648 2439 ntBASIC6.55□□□□□ -1.36
CiitaP79621 Gm14912-201ENSMUST00000120166 1773 ntBASIC6.55□□□□□ -1.36
CiitaP79621 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
CiitaP79621 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
CiitaP79621 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CiitaP79621 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CiitaP79621 Gm11105-201ENSMUST00000112781 478 ntBASIC6.55□□□□□ -1.36
CiitaP79621 Gm14938-201ENSMUST00000119482 943 ntBASIC6.55□□□□□ -1.36
CiitaP79621 Gm15959-201ENSMUST00000121724 368 ntBASIC6.55□□□□□ -1.36
CiitaP79621 Gm13531-201ENSMUST00000121893 543 ntBASIC6.55□□□□□ -1.36
CiitaP79621 Gm25843-201ENSMUST00000122582 314 ntBASIC6.55□□□□□ -1.36
CiitaP79621 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.55□□□□□ -1.36
CiitaP79621 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC6.55□□□□□ -1.36
CiitaP79621 Gm23149-201ENSMUST00000158837 230 ntBASIC6.55□□□□□ -1.36
CiitaP79621 Gm7152-201ENSMUST00000163570 605 ntBASIC6.55□□□□□ -1.36
CiitaP79621 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
CiitaP79621 Gm21772-201ENSMUST00000169213 478 ntBASIC6.55□□□□□ -1.36
CiitaP79621 Gm17126-201ENSMUST00000172276 523 ntBASIC6.55□□□□□ -1.36
CiitaP79621 Gm20480-201ENSMUST00000173953 250 ntBASIC6.55□□□□□ -1.36
CiitaP79621 Mir5125-201ENSMUST00000175240 79 ntBASIC6.55□□□□□ -1.36
CiitaP79621 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.55□□□□□ -1.36
CiitaP79621 Mir7220-201ENSMUST00000183978 60 ntBASIC6.55□□□□□ -1.36
CiitaP79621 Gm37609-201ENSMUST00000191778 678 ntBASIC6.55□□□□□ -1.36
CiitaP79621 Gm18407-201ENSMUST00000192126 790 ntBASIC6.55□□□□□ -1.36
CiitaP79621 Ighv1-44-201ENSMUST00000195597 352 ntBASIC6.55□□□□□ -1.36
CiitaP79621 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC6.55□□□□□ -1.36
CiitaP79621 Gm44607-201ENSMUST00000205611 1090 ntBASIC6.55□□□□□ -1.36
CiitaP79621 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC6.55□□□□□ -1.36
CiitaP79621 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CiitaP79621 Gm4510-201ENSMUST00000218265 427 ntBASIC6.55□□□□□ -1.36
CiitaP79621 Gm18618-201ENSMUST00000222211 473 ntBASIC6.55□□□□□ -1.36
CiitaP79621 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.55□□□□□ -1.36
CiitaP79621 AC154595.2-201ENSMUST00000225067 310 ntBASIC6.55□□□□□ -1.36
CiitaP79621 AC124709.3-201ENSMUST00000227294 171 ntBASIC6.55□□□□□ -1.36
CiitaP79621 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CiitaP79621 Vaultrc5-201ENSMUST00000083211 143 ntBASIC6.55□□□□□ -1.36
CiitaP79621 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CiitaP79621 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms