Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC7.16□□□□□ -1.26
Hmgb1P63158 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC7.16□□□□□ -1.26
Hmgb1P63158 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Hmgb1P63158 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC7.16□□□□□ -1.26
Hmgb1P63158 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC7.16□□□□□ -1.26
Hmgb1P63158 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC7.16□□□□□ -1.26
Hmgb1P63158 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC7.16□□□□□ -1.26
Hmgb1P63158 Gm6611-201ENSMUST00000163830 1272 ntBASIC7.16□□□□□ -1.26
Hmgb1P63158 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Hmgb1P63158 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC7.16□□□□□ -1.26
Hmgb1P63158 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Hmgb1P63158 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Hmgb1P63158 Gm29214-201ENSMUST00000190216 570 ntBASIC7.16□□□□□ -1.26
Hmgb1P63158 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Hmgb1P63158 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Hmgb1P63158 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Hmgb1P63158 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Hmgb1P63158 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC7.16□□□□□ -1.26
Hmgb1P63158 Gm44585-201ENSMUST00000207150 607 ntBASIC7.16□□□□□ -1.26
Hmgb1P63158 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC7.16□□□□□ -1.26
Hmgb1P63158 Gm44911-201ENSMUST00000208436 1062 ntBASIC7.16□□□□□ -1.26
Hmgb1P63158 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Hmgb1P63158 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC7.16□□□□□ -1.26
Hmgb1P63158 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC7.16□□□□□ -1.26
Hmgb1P63158 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Hmgb1P63158 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC7.16□□□□□ -1.26
Hmgb1P63158 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC7.16□□□□□ -1.26
Hmgb1P63158 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Hmgb1P63158 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Hmgb1P63158 Gm37407-201ENSMUST00000194793 1316 ntBASIC7.16□□□□□ -1.26
Hmgb1P63158 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Hmgb1P63158 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Hmgb1P63158 AC149294.7-201ENSMUST00000227475 1432 ntBASIC7.16□□□□□ -1.26
Hmgb1P63158 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Hmgb1P63158 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Hmgb1P63158 AC139754.3-201ENSMUST00000220444 1627 ntBASIC7.16□□□□□ -1.26
Hmgb1P63158 Gm37880-201ENSMUST00000192216 3257 ntBASIC7.16□□□□□ -1.26
Hmgb1P63158 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Hmgb1P63158 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Hmgb1P63158 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Hmgb1P63158 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Hmgb1P63158 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Hmgb1P63158 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Hmgb1P63158 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Hmgb1P63158 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC7.15□□□□□ -1.26
Hmgb1P63158 Gm38077-201ENSMUST00000193657 3245 ntBASIC7.15□□□□□ -1.26
Hmgb1P63158 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
Hmgb1P63158 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Hmgb1P63158 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Hmgb1P63158 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Hmgb1P63158 Gm24888-201ENSMUST00000104387 130 ntBASIC7.15□□□□□ -1.26
Hmgb1P63158 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Hmgb1P63158 Gm15161-201ENSMUST00000117340 387 ntBASIC7.15□□□□□ -1.26
Hmgb1P63158 Gm12392-201ENSMUST00000118014 938 ntBASIC7.15□□□□□ -1.26
Hmgb1P63158 Gm14589-201ENSMUST00000121640 727 ntBASIC7.15□□□□□ -1.26
Hmgb1P63158 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Hmgb1P63158 Gm24441-201ENSMUST00000157235 281 ntBASIC7.15□□□□□ -1.26
Hmgb1P63158 Gm24002-201ENSMUST00000158456 104 ntBASIC7.15□□□□□ -1.26
Hmgb1P63158 Gm24860-201ENSMUST00000158457 276 ntBASIC7.15□□□□□ -1.26
Hmgb1P63158 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Hmgb1P63158 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC7.15□□□□□ -1.26
Hmgb1P63158 Gm18406-201ENSMUST00000185872 669 ntBASIC7.15□□□□□ -1.26
Hmgb1P63158 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC7.15□□□□□ -1.26
Hmgb1P63158 Gm29650-201ENSMUST00000188485 742 ntBASIC7.15□□□□□ -1.26
Hmgb1P63158 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Hmgb1P63158 Gm37103-201ENSMUST00000191830 115 ntBASIC7.15□□□□□ -1.26
Hmgb1P63158 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Hmgb1P63158 Gm43098-201ENSMUST00000199989 1297 ntBASIC7.15□□□□□ -1.26
Hmgb1P63158 Gm45070-201ENSMUST00000208100 246 ntBASIC7.15□□□□□ -1.26
Hmgb1P63158 Gm44656-201ENSMUST00000208428 490 ntBASIC7.15□□□□□ -1.26
Hmgb1P63158 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC7.15□□□□□ -1.26
Hmgb1P63158 Gm4042-201ENSMUST00000216946 637 ntBASIC7.15□□□□□ -1.26
Hmgb1P63158 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC7.15□□□□□ -1.26
Hmgb1P63158 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Hmgb1P63158 AC153357.1-201ENSMUST00000219190 482 ntBASIC7.15□□□□□ -1.26
Hmgb1P63158 Gm18628-201ENSMUST00000220584 475 ntBASIC7.15□□□□□ -1.26
Hmgb1P63158 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC7.15□□□□□ -1.26
Hmgb1P63158 AC155270.1-202ENSMUST00000221503 352 ntBASIC7.15□□□□□ -1.26
Hmgb1P63158 AC211878.1-201ENSMUST00000221668 474 ntBASIC7.15□□□□□ -1.26
Hmgb1P63158 AC131117.2-202ENSMUST00000224539 547 ntBASIC7.15□□□□□ -1.26
Hmgb1P63158 CT030254.1-201ENSMUST00000225450 1078 ntBASIC7.15□□□□□ -1.26
Hmgb1P63158 AC098742.1-201ENSMUST00000227945 373 ntBASIC7.15□□□□□ -1.26
Hmgb1P63158 Gm9788-201ENSMUST00000057038 906 ntBASIC7.15□□□□□ -1.26
Hmgb1P63158 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Hmgb1P63158 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Hmgb1P63158 Gm9519-201ENSMUST00000206108 1337 ntBASIC7.15□□□□□ -1.26
Hmgb1P63158 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.27
Hmgb1P63158 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC7.15□□□□□ -1.27
Hmgb1P63158 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
Hmgb1P63158 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Hmgb1P63158 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Hmgb1P63158 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC7.15□□□□□ -1.27
Hmgb1P63158 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC7.15□□□□□ -1.27
Hmgb1P63158 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Hmgb1P63158 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Hmgb1P63158 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Hmgb1P63158 Gm15583-201ENSMUST00000116191 3510 ntBASIC7.14□□□□□ -1.27
Hmgb1P63158 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Hmgb1P63158 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Hmgb1P63158 Mir688-201ENSMUST00000102055 75 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms