Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HttP42859 Patj-202ENSMUST00000041284 7340 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HttP42859 Vps8-206ENSMUST00000118923 4838 ntTSL 5 BASIC6.04□□□□□ -1.44
HttP42859 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC6.04□□□□□ -1.44
HttP42859 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HttP42859 Gm44898-201ENSMUST00000205934 2223 ntBASIC6.04□□□□□ -1.44
HttP42859 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HttP42859 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HttP42859 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HttP42859 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
HttP42859 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
HttP42859 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HttP42859 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HttP42859 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
HttP42859 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HttP42859 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.04□□□□□ -1.44
HttP42859 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HttP42859 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
HttP42859 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HttP42859 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
HttP42859 Gm3267-201ENSMUST00000118671 473 ntBASIC6.04□□□□□ -1.44
HttP42859 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HttP42859 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC6.04□□□□□ -1.44
HttP42859 Gm9038-201ENSMUST00000203400 604 ntBASIC6.04□□□□□ -1.44
HttP42859 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.04□□□□□ -1.44
HttP42859 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HttP42859 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HttP42859 Rai14-201ENSMUST00000090339 4909 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HttP42859 Zfp638-201ENSMUST00000032088 6199 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
HttP42859 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
HttP42859 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HttP42859 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HttP42859 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HttP42859 Cacna1c-208ENSMUST00000187317 6663 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
HttP42859 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HttP42859 Gm8401-201ENSMUST00000120248 1739 ntBASIC6.03□□□□□ -1.44
HttP42859 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HttP42859 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC6.03□□□□□ -1.44
HttP42859 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HttP42859 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HttP42859 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HttP42859 Gm2622-201ENSMUST00000200018 471 ntBASIC6.03□□□□□ -1.44
HttP42859 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC6.03□□□□□ -1.44
HttP42859 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC6.03□□□□□ -1.44
HttP42859 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HttP42859 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
HttP42859 AC155808.1-201ENSMUST00000219288 409 ntBASIC6.03□□□□□ -1.44
HttP42859 Gm18591-201ENSMUST00000220568 763 ntBASIC6.03□□□□□ -1.44
HttP42859 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HttP42859 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
HttP42859 Pik3ca-203ENSMUST00000108243 6689 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
HttP42859 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
HttP42859 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
HttP42859 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
HttP42859 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HttP42859 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HttP42859 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HttP42859 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HttP42859 Gm24265-201ENSMUST00000101833 141 ntBASIC6.03□□□□□ -1.44
HttP42859 Gm13740-201ENSMUST00000120590 310 ntBASIC6.03□□□□□ -1.44
HttP42859 Gm22122-201ENSMUST00000175147 200 ntBASIC6.03□□□□□ -1.44
HttP42859 Gm24407-201ENSMUST00000177864 141 ntBASIC6.03□□□□□ -1.44
HttP42859 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HttP42859 Gm43235-201ENSMUST00000200121 297 ntBASIC6.03□□□□□ -1.44
HttP42859 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HttP42859 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
HttP42859 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HttP42859 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.03□□□□□ -1.44
HttP42859 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HttP42859 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC6.03□□□□□ -1.44
HttP42859 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HttP42859 Nlgn3-206ENSMUST00000151528 8541 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
HttP42859 Wrn-204ENSMUST00000211498 4856 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HttP42859 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HttP42859 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HttP42859 Gm7312-201ENSMUST00000118798 469 ntBASIC6.03□□□□□ -1.44
HttP42859 Gm12732-201ENSMUST00000121688 180 ntBASIC6.03□□□□□ -1.44
HttP42859 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HttP42859 Gm26153-201ENSMUST00000157433 127 ntBASIC6.03□□□□□ -1.44
HttP42859 Gm3531-201ENSMUST00000162698 489 ntBASIC6.03□□□□□ -1.44
HttP42859 Gm8221-201ENSMUST00000178052 564 ntBASIC6.03□□□□□ -1.44
HttP42859 Gm17915-201ENSMUST00000222077 548 ntBASIC6.03□□□□□ -1.44
HttP42859 AC165953.1-201ENSMUST00000226386 357 ntBASIC6.03□□□□□ -1.44
HttP42859 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
HttP42859 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HttP42859 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HttP42859 Galnt15-201ENSMUST00000022460 6326 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HttP42859 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HttP42859 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.02□□□□□ -1.44
HttP42859 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.44
HttP42859 Gm44043-201ENSMUST00000203426 3253 ntBASIC6.02□□□□□ -1.44
HttP42859 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
HttP42859 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HttP42859 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC6.02□□□□□ -1.45
HttP42859 Pex7-201ENSMUST00000020182 8099 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HttP42859 AC158982.1-205ENSMUST00000227339 1876 ntBASIC6.02□□□□□ -1.45
HttP42859 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
HttP42859 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC6.02□□□□□ -1.45
HttP42859 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HttP42859 Gm24444-201ENSMUST00000157244 308 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms