Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Traf1P39428 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Traf1P39428 Gm22599-201ENSMUST00000157597 132 ntBASIC7.07□□□□□ -1.28
Traf1P39428 Gm6918-201ENSMUST00000167622 1222 ntBASIC7.07□□□□□ -1.28
Traf1P39428 Gm17198-201ENSMUST00000171792 1154 ntBASIC7.07□□□□□ -1.28
Traf1P39428 Gm7952-201ENSMUST00000180540 984 ntBASIC7.07□□□□□ -1.28
Traf1P39428 Mir7220-201ENSMUST00000183978 60 ntBASIC7.07□□□□□ -1.28
Traf1P39428 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Traf1P39428 Gm36939-201ENSMUST00000194889 439 ntBASIC7.07□□□□□ -1.28
Traf1P39428 Gm44316-201ENSMUST00000199274 97 ntBASIC7.07□□□□□ -1.28
Traf1P39428 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC7.07□□□□□ -1.28
Traf1P39428 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Traf1P39428 Gm5990-201ENSMUST00000203126 746 ntBASIC7.07□□□□□ -1.28
Traf1P39428 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC7.07□□□□□ -1.28
Traf1P39428 Gm9685-201ENSMUST00000211275 538 ntBASIC7.07□□□□□ -1.28
Traf1P39428 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Traf1P39428 AC133650.1-201ENSMUST00000217243 578 ntBASIC7.07□□□□□ -1.28
Traf1P39428 AC159208.1-201ENSMUST00000221403 649 ntBASIC7.07□□□□□ -1.28
Traf1P39428 Gm18592-201ENSMUST00000221529 276 ntBASIC7.07□□□□□ -1.28
Traf1P39428 Gm9293-201ENSMUST00000223096 306 ntBASIC7.07□□□□□ -1.28
Traf1P39428 Gm36262-201ENSMUST00000223274 499 ntBASIC7.07□□□□□ -1.28
Traf1P39428 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Traf1P39428 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Traf1P39428 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Traf1P39428 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Traf1P39428 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Traf1P39428 AC121960.2-201ENSMUST00000227349 3446 ntBASIC7.07□□□□□ -1.28
Traf1P39428 Gm44068-201ENSMUST00000204049 2128 ntBASIC7.07□□□□□ -1.28
Traf1P39428 Gm11242-201ENSMUST00000120103 2457 ntBASIC7.07□□□□□ -1.28
Traf1P39428 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Traf1P39428 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Traf1P39428 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Traf1P39428 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Traf1P39428 Gm45838-201ENSMUST00000207355 2447 ntBASIC7.07□□□□□ -1.28
Traf1P39428 Gm2223-201ENSMUST00000112099 1350 ntBASIC7.07□□□□□ -1.28
Traf1P39428 Gm38085-201ENSMUST00000195785 3062 ntBASIC7.07□□□□□ -1.28
Traf1P39428 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC7.06□□□□□ -1.28
Traf1P39428 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Traf1P39428 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Traf1P39428 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Traf1P39428 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC7.06□□□□□ -1.28
Traf1P39428 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC7.06□□□□□ -1.28
Traf1P39428 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Traf1P39428 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC7.06□□□□□ -1.28
Traf1P39428 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC7.06□□□□□ -1.28
Traf1P39428 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Traf1P39428 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Traf1P39428 Gm12077-201ENSMUST00000117049 364 ntBASIC7.06□□□□□ -1.28
Traf1P39428 Gm12115-201ENSMUST00000119969 447 ntBASIC7.06□□□□□ -1.28
Traf1P39428 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Traf1P39428 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC7.06□□□□□ -1.28
Traf1P39428 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC7.06□□□□□ -1.28
Traf1P39428 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC7.06□□□□□ -1.28
Traf1P39428 Mir6992-201ENSMUST00000183342 109 ntBASIC7.06□□□□□ -1.28
Traf1P39428 Gm28885-201ENSMUST00000185615 563 ntBASIC7.06□□□□□ -1.28
Traf1P39428 Trav3n-2-201ENSMUST00000197693 334 ntBASIC7.06□□□□□ -1.28
Traf1P39428 Trav3d-2-201ENSMUST00000199874 334 ntBASIC7.06□□□□□ -1.28
Traf1P39428 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC7.06□□□□□ -1.28
Traf1P39428 Gm44940-201ENSMUST00000206225 1247 ntBASIC7.06□□□□□ -1.28
Traf1P39428 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC7.06□□□□□ -1.28
Traf1P39428 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Traf1P39428 Gm18863-201ENSMUST00000217004 1299 ntBASIC7.06□□□□□ -1.28
Traf1P39428 Gm6991-201ENSMUST00000218475 1178 ntBASIC7.06□□□□□ -1.28
Traf1P39428 AC154484.2-201ENSMUST00000228359 818 ntBASIC7.06□□□□□ -1.28
Traf1P39428 AC163664.2-201ENSMUST00000228894 459 ntBASIC7.06□□□□□ -1.28
Traf1P39428 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Traf1P39428 Gm36947-201ENSMUST00000194709 2249 ntBASIC7.06□□□□□ -1.28
Traf1P39428 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Traf1P39428 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Traf1P39428 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC7.06□□□□□ -1.28
Traf1P39428 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Traf1P39428 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Traf1P39428 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Traf1P39428 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Traf1P39428 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Traf1P39428 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Traf1P39428 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Traf1P39428 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Traf1P39428 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Traf1P39428 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Traf1P39428 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC7.05□□□□□ -1.28
Traf1P39428 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC7.05□□□□□ -1.28
Traf1P39428 Gm25564-201ENSMUST00000104604 132 ntBASIC7.05□□□□□ -1.28
Traf1P39428 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Traf1P39428 Gm14606-201ENSMUST00000117078 1155 ntBASIC7.05□□□□□ -1.28
Traf1P39428 Gm12308-201ENSMUST00000120440 389 ntBASIC7.05□□□□□ -1.28
Traf1P39428 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC7.05□□□□□ -1.28
Traf1P39428 Gm9428-201ENSMUST00000127214 769 ntBASIC7.05□□□□□ -1.28
Traf1P39428 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC7.05□□□□□ -1.28
Traf1P39428 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC7.05□□□□□ -1.28
Traf1P39428 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Traf1P39428 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC7.05□□□□□ -1.28
Traf1P39428 Gm24081-201ENSMUST00000175177 125 ntBASIC7.05□□□□□ -1.28
Traf1P39428 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC7.05□□□□□ -1.28
Traf1P39428 Gm6472-201ENSMUST00000178147 651 ntBASIC7.05□□□□□ -1.28
Traf1P39428 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Traf1P39428 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Traf1P39428 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC7.05□□□□□ -1.28
Traf1P39428 Gm43744-201ENSMUST00000196387 688 ntBASIC7.05□□□□□ -1.28
Traf1P39428 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms