Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm25489-201ENSMUST00000158727 141 ntBASIC5.64□□□□□ -1.51
Sftpa1P35242 Gm23806-201ENSMUST00000175157 109 ntBASIC5.64□□□□□ -1.51
Sftpa1P35242 Gm24465-201ENSMUST00000178398 107 ntBASIC5.64□□□□□ -1.51
Sftpa1P35242 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Sftpa1P35242 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC5.64□□□□□ -1.51
Sftpa1P35242 Gm27762-201ENSMUST00000183417 109 ntBASIC5.64□□□□□ -1.51
Sftpa1P35242 Gm28149-201ENSMUST00000187102 378 ntBASIC5.64□□□□□ -1.51
Sftpa1P35242 Gm28768-201ENSMUST00000189034 378 ntBASIC5.64□□□□□ -1.51
Sftpa1P35242 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC5.64□□□□□ -1.51
Sftpa1P35242 Gm37681-201ENSMUST00000193880 727 ntBASIC5.64□□□□□ -1.51
Sftpa1P35242 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sftpa1P35242 Gm38670-201ENSMUST00000199248 77 ntBASIC5.64□□□□□ -1.51
Sftpa1P35242 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC5.64□□□□□ -1.51
Sftpa1P35242 Gm43794-201ENSMUST00000200971 692 ntBASIC5.64□□□□□ -1.51
Sftpa1P35242 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sftpa1P35242 Gm7439-201ENSMUST00000214053 835 ntBASIC5.64□□□□□ -1.51
Sftpa1P35242 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC5.64□□□□□ -1.51
Sftpa1P35242 AC153870.1-201ENSMUST00000219599 560 ntBASIC5.64□□□□□ -1.51
Sftpa1P35242 Gm6068-201ENSMUST00000222270 387 ntBASIC5.64□□□□□ -1.51
Sftpa1P35242 AC121137.1-201ENSMUST00000225272 602 ntBASIC5.64□□□□□ -1.51
Sftpa1P35242 Gm5341-201ENSMUST00000058881 489 ntBASIC5.64□□□□□ -1.51
Sftpa1P35242 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sftpa1P35242 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC5.64□□□□□ -1.51
Sftpa1P35242 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.64□□□□□ -1.51
Sftpa1P35242 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC5.64□□□□□ -1.51
Sftpa1P35242 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Sftpa1P35242 Gm42873-201ENSMUST00000196110 1726 ntBASIC5.64□□□□□ -1.51
Sftpa1P35242 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sftpa1P35242 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Sftpa1P35242 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sftpa1P35242 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sftpa1P35242 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sftpa1P35242 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sftpa1P35242 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC5.64□□□□□ -1.51
Sftpa1P35242 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sftpa1P35242 AC174459.1-201ENSMUST00000224476 1943 ntBASIC5.64□□□□□ -1.51
Sftpa1P35242 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.64□□□□□ -1.51
Sftpa1P35242 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sftpa1P35242 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sftpa1P35242 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Sftpa1P35242 Gm10062-201ENSMUST00000072180 1470 ntBASIC5.64□□□□□ -1.51
Sftpa1P35242 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sftpa1P35242 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sftpa1P35242 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sftpa1P35242 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sftpa1P35242 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sftpa1P35242 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sftpa1P35242 Nsd1-207ENSMUST00000224973 9905 ntBASIC5.63□□□□□ -1.51
Sftpa1P35242 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sftpa1P35242 Gm38081-201ENSMUST00000192680 1645 ntBASIC5.63□□□□□ -1.51
Sftpa1P35242 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sftpa1P35242 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sftpa1P35242 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sftpa1P35242 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC5.63□□□□□ -1.51
Sftpa1P35242 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Sftpa1P35242 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sftpa1P35242 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sftpa1P35242 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sftpa1P35242 Gm26078-201ENSMUST00000104067 128 ntBASIC5.63□□□□□ -1.51
Sftpa1P35242 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sftpa1P35242 Gm11498-201ENSMUST00000120660 949 ntBASIC5.63□□□□□ -1.51
Sftpa1P35242 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC5.63□□□□□ -1.51
Sftpa1P35242 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sftpa1P35242 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC5.63□□□□□ -1.51
Sftpa1P35242 Gm24236-201ENSMUST00000157794 134 ntBASIC5.63□□□□□ -1.51
Sftpa1P35242 Gm25603-201ENSMUST00000158361 105 ntBASIC5.63□□□□□ -1.51
Sftpa1P35242 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC5.63□□□□□ -1.51
Sftpa1P35242 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Sftpa1P35242 Gm22420-201ENSMUST00000178795 126 ntBASIC5.63□□□□□ -1.51
Sftpa1P35242 Gm8321-201ENSMUST00000181691 980 ntBASIC5.63□□□□□ -1.51
Sftpa1P35242 Gm27004-201ENSMUST00000183300 727 ntBASIC5.63□□□□□ -1.51
Sftpa1P35242 Gm28017-201ENSMUST00000183434 126 ntBASIC5.63□□□□□ -1.51
Sftpa1P35242 Gm27985-201ENSMUST00000185112 378 ntBASIC5.63□□□□□ -1.51
Sftpa1P35242 Gm29011-201ENSMUST00000191059 712 ntBASIC5.63□□□□□ -1.51
Sftpa1P35242 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Sftpa1P35242 Gm43148-201ENSMUST00000198237 520 ntBASIC5.63□□□□□ -1.51
Sftpa1P35242 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.63□□□□□ -1.51
Sftpa1P35242 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sftpa1P35242 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sftpa1P35242 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.63□□□□□ -1.51
Sftpa1P35242 Gm18705-201ENSMUST00000215985 913 ntBASIC5.63□□□□□ -1.51
Sftpa1P35242 AC108846.4-201ENSMUST00000216783 341 ntBASIC5.63□□□□□ -1.51
Sftpa1P35242 AC134537.2-201ENSMUST00000217770 575 ntBASIC5.63□□□□□ -1.51
Sftpa1P35242 AC121804.1-201ENSMUST00000221016 394 ntBASIC5.63□□□□□ -1.51
Sftpa1P35242 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.63□□□□□ -1.51
Sftpa1P35242 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sftpa1P35242 AC165260.1-201ENSMUST00000224127 683 ntBASIC5.63□□□□□ -1.51
Sftpa1P35242 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.63□□□□□ -1.51
Sftpa1P35242 AC154452.1-201ENSMUST00000225819 241 ntBASIC5.63□□□□□ -1.51
Sftpa1P35242 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sftpa1P35242 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sftpa1P35242 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
Sftpa1P35242 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sftpa1P35242 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sftpa1P35242 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sftpa1P35242 AC125487.2-201ENSMUST00000219810 1300 ntBASIC5.63□□□□□ -1.51
Sftpa1P35242 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sftpa1P35242 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sftpa1P35242 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC5.63□□□□□ -1.51
Sftpa1P35242 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 138.5 ms