Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Gm44411-201ENSMUST00000204172 349 ntBASIC5.99□□□□□ -1.45
Hcn3O88705 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC5.99□□□□□ -1.45
Hcn3O88705 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC5.99□□□□□ -1.45
Hcn3O88705 AC138329.1-201ENSMUST00000225040 471 ntBASIC5.99□□□□□ -1.45
Hcn3O88705 AC117949.2-201ENSMUST00000225900 584 ntBASIC5.99□□□□□ -1.45
Hcn3O88705 AC151730.1-201ENSMUST00000226106 448 ntBASIC5.99□□□□□ -1.45
Hcn3O88705 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Hcn3O88705 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Hcn3O88705 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Hcn3O88705 Mir3068-201ENSMUST00000083004 136 ntBASIC5.99□□□□□ -1.45
Hcn3O88705 Gm23102-201ENSMUST00000083724 116 ntBASIC5.99□□□□□ -1.45
Hcn3O88705 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Hcn3O88705 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Hcn3O88705 AC164107.1-202ENSMUST00000228953 1816 ntBASIC5.99□□□□□ -1.45
Hcn3O88705 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.99□□□□□ -1.45
Hcn3O88705 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Hcn3O88705 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Hcn3O88705 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC5.99□□□□□ -1.45
Hcn3O88705 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.99□□□□□ -1.45
Hcn3O88705 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hcn3O88705 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hcn3O88705 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.98□□□□□ -1.45
Hcn3O88705 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Hcn3O88705 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hcn3O88705 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hcn3O88705 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
Hcn3O88705 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hcn3O88705 Gm11501-201ENSMUST00000118039 581 ntBASIC5.98□□□□□ -1.45
Hcn3O88705 Gm12988-201ENSMUST00000119054 478 ntBASIC5.98□□□□□ -1.45
Hcn3O88705 Gm6987-201ENSMUST00000119319 428 ntBASIC5.98□□□□□ -1.45
Hcn3O88705 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Hcn3O88705 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC5.98□□□□□ -1.45
Hcn3O88705 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hcn3O88705 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC5.98□□□□□ -1.45
Hcn3O88705 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hcn3O88705 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hcn3O88705 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hcn3O88705 Gm17511-201ENSMUST00000172206 342 ntBASIC5.98□□□□□ -1.45
Hcn3O88705 Gm20432-201ENSMUST00000173716 250 ntBASIC5.98□□□□□ -1.45
Hcn3O88705 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
Hcn3O88705 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC5.98□□□□□ -1.45
Hcn3O88705 Gm21959-201ENSMUST00000178439 452 ntBASIC5.98□□□□□ -1.45
Hcn3O88705 Gm18849-201ENSMUST00000189861 560 ntBASIC5.98□□□□□ -1.45
Hcn3O88705 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hcn3O88705 Gm37716-201ENSMUST00000193553 947 ntBASIC5.98□□□□□ -1.45
Hcn3O88705 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC5.98□□□□□ -1.45
Hcn3O88705 Gm32158-201ENSMUST00000200135 404 ntBASIC5.98□□□□□ -1.45
Hcn3O88705 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC5.98□□□□□ -1.45
Hcn3O88705 Gm44665-201ENSMUST00000205381 251 ntBASIC5.98□□□□□ -1.45
Hcn3O88705 Gm19196-201ENSMUST00000209258 357 ntBASIC5.98□□□□□ -1.45
Hcn3O88705 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.98□□□□□ -1.45
Hcn3O88705 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hcn3O88705 AC153801.1-201ENSMUST00000217904 947 ntBASIC5.98□□□□□ -1.45
Hcn3O88705 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC5.98□□□□□ -1.45
Hcn3O88705 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
Hcn3O88705 AC170086.2-201ENSMUST00000224733 803 ntBASIC5.98□□□□□ -1.45
Hcn3O88705 AC154692.1-201ENSMUST00000228314 544 ntBASIC5.98□□□□□ -1.45
Hcn3O88705 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hcn3O88705 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hcn3O88705 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hcn3O88705 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hcn3O88705 Mir106b-201ENSMUST00000083580 82 ntBASIC5.98□□□□□ -1.45
Hcn3O88705 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.98□□□□□ -1.45
Hcn3O88705 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hcn3O88705 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hcn3O88705 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Hcn3O88705 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC5.98□□□□□ -1.45
Hcn3O88705 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hcn3O88705 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Hcn3O88705 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC5.98□□□□□ -1.45
Hcn3O88705 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hcn3O88705 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC5.98□□□□□ -1.45
Hcn3O88705 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Hcn3O88705 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.98□□□□□ -1.45
Hcn3O88705 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hcn3O88705 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
Hcn3O88705 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hcn3O88705 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hcn3O88705 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hcn3O88705 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.97□□□□□ -1.45
Hcn3O88705 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Hcn3O88705 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hcn3O88705 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Hcn3O88705 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Hcn3O88705 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.97□□□□□ -1.45
Hcn3O88705 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Hcn3O88705 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Hcn3O88705 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hcn3O88705 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hcn3O88705 Snord88a-201ENSMUST00000116723 90 ntBASIC5.97□□□□□ -1.45
Hcn3O88705 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC5.97□□□□□ -1.45
Hcn3O88705 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
Hcn3O88705 Gm5578-201ENSMUST00000121490 1236 ntBASIC5.97□□□□□ -1.45
Hcn3O88705 Gm13724-201ENSMUST00000122395 1155 ntBASIC5.97□□□□□ -1.45
Hcn3O88705 Gm23888-201ENSMUST00000122690 253 ntBASIC5.97□□□□□ -1.45
Hcn3O88705 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC5.97□□□□□ -1.45
Hcn3O88705 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC5.97□□□□□ -1.45
Hcn3O88705 Gm18833-201ENSMUST00000173218 862 ntBASIC5.97□□□□□ -1.45
Hcn3O88705 Gm23810-201ENSMUST00000175150 74 ntBASIC5.97□□□□□ -1.45
Hcn3O88705 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms