Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn5O54942 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn5O54942 Gm12494-201ENSMUST00000121684 521 ntBASIC6.2□□□□□ -1.42
Cldn5O54942 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn5O54942 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC6.2□□□□□ -1.42
Cldn5O54942 Gm25459-201ENSMUST00000157953 114 ntBASIC6.2□□□□□ -1.42
Cldn5O54942 Mir5125-201ENSMUST00000175240 79 ntBASIC6.2□□□□□ -1.42
Cldn5O54942 Gm24303-201ENSMUST00000178237 126 ntBASIC6.2□□□□□ -1.42
Cldn5O54942 Mir6973b-201ENSMUST00000184185 80 ntBASIC6.2□□□□□ -1.42
Cldn5O54942 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC6.2□□□□□ -1.42
Cldn5O54942 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Cldn5O54942 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC6.2□□□□□ -1.42
Cldn5O54942 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC6.2□□□□□ -1.42
Cldn5O54942 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC6.2□□□□□ -1.42
Cldn5O54942 Gm4742-201ENSMUST00000200261 771 ntBASIC6.2□□□□□ -1.42
Cldn5O54942 Gm44053-201ENSMUST00000203364 929 ntBASIC6.2□□□□□ -1.42
Cldn5O54942 Gm44253-201ENSMUST00000203387 628 ntBASIC6.2□□□□□ -1.42
Cldn5O54942 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.2□□□□□ -1.42
Cldn5O54942 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn5O54942 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC6.2□□□□□ -1.42
Cldn5O54942 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.2□□□□□ -1.42
Cldn5O54942 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC6.2□□□□□ -1.42
Cldn5O54942 CT025598.1-201ENSMUST00000225140 427 ntBASIC6.2□□□□□ -1.42
Cldn5O54942 CU062626.1-201ENSMUST00000225248 505 ntBASIC6.2□□□□□ -1.42
Cldn5O54942 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Cldn5O54942 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC6.2□□□□□ -1.42
Cldn5O54942 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn5O54942 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Cldn5O54942 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Cldn5O54942 Gm44584-201ENSMUST00000208395 2880 ntBASIC6.2□□□□□ -1.42
Cldn5O54942 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cldn5O54942 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn5O54942 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn5O54942 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.2□□□□□ -1.42
Cldn5O54942 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn5O54942 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cldn5O54942 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
Cldn5O54942 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn5O54942 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn5O54942 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn5O54942 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn5O54942 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.2□□□□□ -1.42
Cldn5O54942 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cldn5O54942 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn5O54942 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cldn5O54942 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cldn5O54942 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cldn5O54942 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC6.19□□□□□ -1.42
Cldn5O54942 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cldn5O54942 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cldn5O54942 Gm44667-201ENSMUST00000207632 3337 ntBASIC6.19□□□□□ -1.42
Cldn5O54942 Gm45413-201ENSMUST00000210389 3538 ntBASIC6.19□□□□□ -1.42
Cldn5O54942 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Cldn5O54942 Gm37703-201ENSMUST00000192292 1784 ntBASIC6.19□□□□□ -1.42
Cldn5O54942 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.19□□□□□ -1.42
Cldn5O54942 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cldn5O54942 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Cldn5O54942 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cldn5O54942 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.19□□□□□ -1.42
Cldn5O54942 Gm12985-201ENSMUST00000118376 183 ntBASIC6.19□□□□□ -1.42
Cldn5O54942 Gm11987-201ENSMUST00000118524 381 ntBASIC6.19□□□□□ -1.42
Cldn5O54942 Gm12099-201ENSMUST00000118660 750 ntBASIC6.19□□□□□ -1.42
Cldn5O54942 Gm6382-201ENSMUST00000118873 942 ntBASIC6.19□□□□□ -1.42
Cldn5O54942 Gm15971-201ENSMUST00000119372 211 ntBASIC6.19□□□□□ -1.42
Cldn5O54942 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cldn5O54942 Gm25826-201ENSMUST00000157090 137 ntBASIC6.19□□□□□ -1.42
Cldn5O54942 Gm22724-201ENSMUST00000158091 127 ntBASIC6.19□□□□□ -1.42
Cldn5O54942 Gm25439-201ENSMUST00000158280 131 ntBASIC6.19□□□□□ -1.42
Cldn5O54942 Gm27762-201ENSMUST00000183417 109 ntBASIC6.19□□□□□ -1.42
Cldn5O54942 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC6.19□□□□□ -1.42
Cldn5O54942 Gm28066-201ENSMUST00000188657 472 ntBASIC6.19□□□□□ -1.42
Cldn5O54942 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC6.19□□□□□ -1.42
Cldn5O54942 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC6.19□□□□□ -1.42
Cldn5O54942 Gm2287-202ENSMUST00000199619 1000 ntBASIC6.19□□□□□ -1.42
Cldn5O54942 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC6.19□□□□□ -1.42
Cldn5O54942 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC6.19□□□□□ -1.42
Cldn5O54942 Gm31861-201ENSMUST00000204563 672 ntBASIC6.19□□□□□ -1.42
Cldn5O54942 Gm5830-201ENSMUST00000049117 443 ntBASIC6.19□□□□□ -1.42
Cldn5O54942 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Cldn5O54942 Mir143-201ENSMUST00000083511 63 ntBASIC6.19□□□□□ -1.42
Cldn5O54942 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cldn5O54942 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Cldn5O54942 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.19□□□□□ -1.42
Cldn5O54942 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Cldn5O54942 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
Cldn5O54942 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC6.18□□□□□ -1.42
Cldn5O54942 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cldn5O54942 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.18□□□□□ -1.42
Cldn5O54942 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Cldn5O54942 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cldn5O54942 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Cldn5O54942 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cldn5O54942 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.18□□□□□ -1.42
Cldn5O54942 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cldn5O54942 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cldn5O54942 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC6.18□□□□□ -1.42
Cldn5O54942 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cldn5O54942 Gm24719-201ENSMUST00000157520 110 ntBASIC6.18□□□□□ -1.42
Cldn5O54942 Gm23030-201ENSMUST00000158004 273 ntBASIC6.18□□□□□ -1.42
Cldn5O54942 Gm25445-201ENSMUST00000158996 299 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 162.4 ms