Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm45358-201ENSMUST00000209492 2305 ntBASIC8.02□□□□□ -1.13
NpcdF8VQB8 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
NpcdF8VQB8 AC123629.1-201ENSMUST00000225669 1364 ntBASIC8.02□□□□□ -1.13
NpcdF8VQB8 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Igkv11-106-201ENSMUST00000103331 346 ntBASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm25919-201ENSMUST00000104271 132 ntBASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm15159-201ENSMUST00000117062 764 ntBASIC8.02□□□□□ -1.13
NpcdF8VQB8 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm12565-201ENSMUST00000119004 649 ntBASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm15967-201ENSMUST00000120027 1116 ntBASIC8.02□□□□□ -1.13
NpcdF8VQB8 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm11848-201ENSMUST00000121207 973 ntBASIC8.02□□□□□ -1.13
NpcdF8VQB8 Mir1903-201ENSMUST00000122574 80 ntBASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm22342-201ENSMUST00000122647 298 ntBASIC8.02□□□□□ -1.13
NpcdF8VQB8 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm38181-201ENSMUST00000181357 720 ntBASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm27024-201ENSMUST00000182561 755 ntBASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm28080-201ENSMUST00000188552 722 ntBASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm6680-201ENSMUST00000192789 950 ntBASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm7299-201ENSMUST00000194441 581 ntBASIC8.02□□□□□ -1.13
NpcdF8VQB8 Trbv9-201ENSMUST00000194494 290 ntBASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm43212-201ENSMUST00000198208 394 ntBASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC8.02□□□□□ -1.13
NpcdF8VQB8 AC153975.1-201ENSMUST00000220087 926 ntBASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm19134-201ENSMUST00000221203 487 ntBASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC8.02□□□□□ -1.13
NpcdF8VQB8 AC154861.1-201ENSMUST00000223767 800 ntBASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Desi2-202ENSMUST00000069568 1193 ntBASIC8.02□□□□□ -1.13
NpcdF8VQB8 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
NpcdF8VQB8 AC138284.1-201ENSMUST00000214258 3236 ntBASIC8.02□□□□□ -1.13
NpcdF8VQB8 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm10693-201ENSMUST00000144146 2037 ntBASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm42685-201ENSMUST00000200378 2390 ntBASIC8.02□□□□□ -1.13
NpcdF8VQB8 Gm43728-201ENSMUST00000198817 2622 ntBASIC8.01□□□□□ -1.13
NpcdF8VQB8 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
NpcdF8VQB8 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
NpcdF8VQB8 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
NpcdF8VQB8 Gm20768-201ENSMUST00000199527 2338 ntBASIC8.01□□□□□ -1.13
NpcdF8VQB8 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
NpcdF8VQB8 AC165260.6-206ENSMUST00000223884 3698 ntBASIC8.01□□□□□ -1.13
NpcdF8VQB8 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
NpcdF8VQB8 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
NpcdF8VQB8 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC8.01□□□□□ -1.13
NpcdF8VQB8 Gm11407-201ENSMUST00000120362 1058 ntBASIC8.01□□□□□ -1.13
NpcdF8VQB8 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
NpcdF8VQB8 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC8.01□□□□□ -1.13
NpcdF8VQB8 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
NpcdF8VQB8 Gm24733-201ENSMUST00000158863 253 ntBASIC8.01□□□□□ -1.13
NpcdF8VQB8 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC8.01□□□□□ -1.13
NpcdF8VQB8 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
NpcdF8VQB8 Gm19840-201ENSMUST00000169624 882 ntBASIC8.01□□□□□ -1.13
NpcdF8VQB8 Gm17198-201ENSMUST00000171792 1154 ntBASIC8.01□□□□□ -1.13
NpcdF8VQB8 Gm20432-201ENSMUST00000173716 250 ntBASIC8.01□□□□□ -1.13
NpcdF8VQB8 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC8.01□□□□□ -1.13
NpcdF8VQB8 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
NpcdF8VQB8 Gm8614-201ENSMUST00000182528 978 ntBASIC8.01□□□□□ -1.13
NpcdF8VQB8 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC8.01□□□□□ -1.13
NpcdF8VQB8 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC8.01□□□□□ -1.13
NpcdF8VQB8 Gm27152-201ENSMUST00000183828 99 ntBASIC8.01□□□□□ -1.13
NpcdF8VQB8 Gm8419-201ENSMUST00000189886 412 ntBASIC8.01□□□□□ -1.13
NpcdF8VQB8 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC8.01□□□□□ -1.13
NpcdF8VQB8 Gm37322-201ENSMUST00000193409 337 ntBASIC8.01□□□□□ -1.13
NpcdF8VQB8 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC8.01□□□□□ -1.13
NpcdF8VQB8 Gm18861-201ENSMUST00000202509 1186 ntBASIC8.01□□□□□ -1.13
NpcdF8VQB8 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC8.01□□□□□ -1.13
NpcdF8VQB8 AC154552.5-201ENSMUST00000222352 207 ntBASIC8.01□□□□□ -1.13
NpcdF8VQB8 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
NpcdF8VQB8 AC117797.2-201ENSMUST00000224419 531 ntBASIC8.01□□□□□ -1.13
NpcdF8VQB8 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms