Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC6.13□□□□□ -1.43
Col4a6B1AVK5 Mir8097-201ENSMUST00000185150 119 ntBASIC6.13□□□□□ -1.43
Col4a6B1AVK5 Igkv15-101-201ENSMUST00000195917 299 ntBASIC6.13□□□□□ -1.43
Col4a6B1AVK5 Gm18702-201ENSMUST00000196923 588 ntBASIC6.13□□□□□ -1.43
Col4a6B1AVK5 Gm6543-201ENSMUST00000197353 808 ntBASIC6.13□□□□□ -1.43
Col4a6B1AVK5 Glud-ps-201ENSMUST00000206310 657 ntBASIC6.13□□□□□ -1.43
Col4a6B1AVK5 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col4a6B1AVK5 Gm6009-201ENSMUST00000210848 280 ntBASIC6.13□□□□□ -1.43
Col4a6B1AVK5 Gm10709-201ENSMUST00000213318 480 ntBASIC6.13□□□□□ -1.43
Col4a6B1AVK5 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.13□□□□□ -1.43
Col4a6B1AVK5 AC154436.2-201ENSMUST00000227408 208 ntBASIC6.13□□□□□ -1.43
Col4a6B1AVK5 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col4a6B1AVK5 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col4a6B1AVK5 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Col4a6B1AVK5 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Col4a6B1AVK5 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col4a6B1AVK5 Satb1-213ENSMUST00000169480 6194 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Col4a6B1AVK5 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col4a6B1AVK5 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col4a6B1AVK5 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col4a6B1AVK5 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col4a6B1AVK5 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col4a6B1AVK5 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC6.12□□□□□ -1.43
Col4a6B1AVK5 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 AC151984.1-201ENSMUST00000218261 2976 ntBASIC6.12□□□□□ -1.43
Col4a6B1AVK5 AC124549.1-201ENSMUST00000225912 333 ntBASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Gm38070-201ENSMUST00000191850 6480 ntBASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Gm43769-201ENSMUST00000201871 4323 ntBASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col4a6B1AVK5 Gm37364-201ENSMUST00000192533 3920 ntBASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Gm16089-201ENSMUST00000117679 336 ntBASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC6.11□□□□□ -1.43
Col4a6B1AVK5 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Gm24295-201ENSMUST00000158298 131 ntBASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Gm9006-201ENSMUST00000165520 841 ntBASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Gm25534-201ENSMUST00000175365 125 ntBASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Mir7685-201ENSMUST00000183555 62 ntBASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Mir7687-201ENSMUST00000184722 59 ntBASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Mir6975-201ENSMUST00000184879 61 ntBASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Gm44456-201ENSMUST00000196554 89 ntBASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 AC117240.2-201ENSMUST00000220921 263 ntBASIC6.11□□□□□ -1.43
Col4a6B1AVK5 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Gm43162-201ENSMUST00000198292 1770 ntBASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms