Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC5.01□□□□□ -1.61
Col6a4A2AX52 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a4A2AX52 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a4A2AX52 Gm42568-201ENSMUST00000195639 1841 ntBASIC5.01□□□□□ -1.61
Col6a4A2AX52 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a4A2AX52 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a4A2AX52 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col6a4A2AX52 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.01□□□□□ -1.61
Col6a4A2AX52 Gm37033-201ENSMUST00000193199 7350 ntBASIC5.01□□□□□ -1.61
Col6a4A2AX52 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col6a4A2AX52 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col6a4A2AX52 Gm38377-201ENSMUST00000193253 3772 ntBASIC5.01□□□□□ -1.61
Col6a4A2AX52 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a4A2AX52 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col6a4A2AX52 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a4A2AX52 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a4A2AX52 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a4A2AX52 Gm14842-201ENSMUST00000119577 269 ntBASIC5.01□□□□□ -1.61
Col6a4A2AX52 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC5.01□□□□□ -1.61
Col6a4A2AX52 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a4A2AX52 Gm22094-201ENSMUST00000158976 117 ntBASIC5.01□□□□□ -1.61
Col6a4A2AX52 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.01□□□□□ -1.61
Col6a4A2AX52 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC5.01□□□□□ -1.61
Col6a4A2AX52 Mir7031-201ENSMUST00000183860 65 ntBASIC5.01□□□□□ -1.61
Col6a4A2AX52 Gm5334-201ENSMUST00000187472 720 ntBASIC5.01□□□□□ -1.61
Col6a4A2AX52 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a4A2AX52 Gm8826-201ENSMUST00000193161 948 ntBASIC5.01□□□□□ -1.61
Col6a4A2AX52 Gm43631-201ENSMUST00000202011 369 ntBASIC5.01□□□□□ -1.61
Col6a4A2AX52 Gm3257-201ENSMUST00000207217 675 ntBASIC5.01□□□□□ -1.61
Col6a4A2AX52 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.01□□□□□ -1.61
Col6a4A2AX52 CT025579.3-201ENSMUST00000224543 451 ntBASIC5.01□□□□□ -1.61
Col6a4A2AX52 CU062626.1-201ENSMUST00000225248 505 ntBASIC5.01□□□□□ -1.61
Col6a4A2AX52 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col6a4A2AX52 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col6a4A2AX52 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a4A2AX52 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col6a4A2AX52 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col6a4A2AX52 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Col6a4A2AX52 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a4A2AX52 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Col6a4A2AX52 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC5□□□□□ -1.61
Col6a4A2AX52 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Col6a4A2AX52 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col6a4A2AX52 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Col6a4A2AX52 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a4A2AX52 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a4A2AX52 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col6a4A2AX52 Mir708-201ENSMUST00000102189 109 ntBASIC5□□□□□ -1.61
Col6a4A2AX52 Gm25758-201ENSMUST00000103987 129 ntBASIC5□□□□□ -1.61
Col6a4A2AX52 Gm11498-201ENSMUST00000120660 949 ntBASIC5□□□□□ -1.61
Col6a4A2AX52 Gm6067-201ENSMUST00000121648 491 ntBASIC5□□□□□ -1.61
Col6a4A2AX52 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col6a4A2AX52 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col6a4A2AX52 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC5□□□□□ -1.61
Col6a4A2AX52 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Col6a4A2AX52 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col6a4A2AX52 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5□□□□□ -1.61
Col6a4A2AX52 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5□□□□□ -1.61
Col6a4A2AX52 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col6a4A2AX52 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC5□□□□□ -1.61
Col6a4A2AX52 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col6a4A2AX52 Gm2011-203ENSMUST00000203750 435 ntBASIC5□□□□□ -1.61
Col6a4A2AX52 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5□□□□□ -1.61
Col6a4A2AX52 Gm45196-201ENSMUST00000206751 825 ntBASIC5□□□□□ -1.61
Col6a4A2AX52 Gm5373-201ENSMUST00000212113 1050 ntBASIC5□□□□□ -1.61
Col6a4A2AX52 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a4A2AX52 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col6a4A2AX52 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col6a4A2AX52 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC5□□□□□ -1.61
Col6a4A2AX52 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a4A2AX52 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col6a4A2AX52 Gm43581-201ENSMUST00000196766 2864 ntBASIC5□□□□□ -1.61
Col6a4A2AX52 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col6a4A2AX52 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a4A2AX52 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a4A2AX52 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Col6a4A2AX52 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC5□□□□□ -1.61
Col6a4A2AX52 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a4A2AX52 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a4A2AX52 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC5□□□□□ -1.61
Col6a4A2AX52 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Col6a4A2AX52 Gm21036-201ENSMUST00000207544 2611 ntBASIC5□□□□□ -1.61
Col6a4A2AX52 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5□□□□□ -1.61
Col6a4A2AX52 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col6a4A2AX52 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5□□□□□ -1.61
Col6a4A2AX52 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
Col6a4A2AX52 Gm9499-201ENSMUST00000180888 964 ntBASIC5□□□□□ -1.61
Col6a4A2AX52 Mir7087-201ENSMUST00000184840 70 ntBASIC5□□□□□ -1.61
Col6a4A2AX52 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col6a4A2AX52 Gm28507-201ENSMUST00000189737 703 ntBASIC5□□□□□ -1.61
Col6a4A2AX52 Gm18587-201ENSMUST00000213736 841 ntBASIC5□□□□□ -1.61
Col6a4A2AX52 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC5□□□□□ -1.61
Col6a4A2AX52 AC159208.1-201ENSMUST00000221403 649 ntBASIC5□□□□□ -1.61
Col6a4A2AX52 Gm46369-201ENSMUST00000221577 401 ntBASIC5□□□□□ -1.61
Col6a4A2AX52 AL807824.1-201ENSMUST00000223151 183 ntBASIC5□□□□□ -1.61
Col6a4A2AX52 AC192088.3-201ENSMUST00000227858 831 ntBASIC5□□□□□ -1.61
Col6a4A2AX52 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col6a4A2AX52 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col6a4A2AX52 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC5□□□□□ -1.61
Col6a4A2AX52 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms