Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm25489-201ENSMUST00000158727 141 ntBASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Gm9006-201ENSMUST00000165520 841 ntBASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Gm2959-201ENSMUST00000169844 621 ntBASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Gm8930-201ENSMUST00000201693 768 ntBASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Gm43973-201ENSMUST00000203562 210 ntBASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Gm43314-201ENSMUST00000196744 2231 ntBASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.56□□□□□ -1.36
Scn3aA2ASI5 AC154257.1-201ENSMUST00000224811 1525 ntBASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Gm13537-201ENSMUST00000120467 267 ntBASIC6.56□□□□□ -1.36
Scn3aA2ASI5 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC6.56□□□□□ -1.36
Scn3aA2ASI5 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Gm43467-201ENSMUST00000197441 437 ntBASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.56□□□□□ -1.36
Scn3aA2ASI5 AC154583.1-201ENSMUST00000224788 655 ntBASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Gm37738-201ENSMUST00000192396 4716 ntBASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Fam26d-202ENSMUST00000218239 3075 ntBASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Gm13451-201ENSMUST00000117649 592 ntBASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Gm15186-201ENSMUST00000119345 563 ntBASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Gm24692-201ENSMUST00000157761 146 ntBASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Gm2325-201ENSMUST00000186637 581 ntBASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Gm6137-201ENSMUST00000187552 578 ntBASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Gm28467-201ENSMUST00000190981 318 ntBASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Gm5087-204ENSMUST00000225820 645 ntBASIC6.55□□□□□ -1.36
Scn3aA2ASI5 AC123665.6-201ENSMUST00000228568 538 ntBASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Gm7887-201ENSMUST00000056948 537 ntBASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC6.55□□□□□ -1.36
Scn3aA2ASI5 AC136019.1-201ENSMUST00000226503 1412 ntBASIC6.55□□□□□ -1.36
Scn3aA2ASI5 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Scn3aA2ASI5 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.55□□□□□ -1.36
Scn3aA2ASI5 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6.55□□□□□ -1.36
Scn3aA2ASI5 AC135669.2-201ENSMUST00000215636 4958 ntBASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.55□□□□□ -1.36
Scn3aA2ASI5 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Scn3aA2ASI5 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Gm25919-201ENSMUST00000104271 132 ntBASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Gm11481-201ENSMUST00000120069 255 ntBASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Gm7700-201ENSMUST00000120273 970 ntBASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Gm7825-201ENSMUST00000204046 416 ntBASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Gm8039-201ENSMUST00000204758 712 ntBASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 AC122034.1-201ENSMUST00000227641 595 ntBASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Robo2-210ENSMUST00000226478 8059 ntBASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Gm37940-201ENSMUST00000194243 3251 ntBASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms