Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm15300-201ENSMUST00000122324 279 ntBASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Gm25782-201ENSMUST00000122526 289 ntBASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Gm20620-201ENSMUST00000177528 168 ntBASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Gm18427-201ENSMUST00000195422 515 ntBASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Ass-ps1-201ENSMUST00000197717 761 ntBASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Gm44108-201ENSMUST00000203525 422 ntBASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Gm45082-201ENSMUST00000206082 601 ntBASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 AC153357.1-201ENSMUST00000219190 482 ntBASIC5.88□□□□□ -1.47
H2afb2S4R1M3 AC154767.2-201ENSMUST00000224584 414 ntBASIC5.88□□□□□ -1.47
H2afb2S4R1M3 AC161252.1-201ENSMUST00000225536 467 ntBASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Gm6990-201ENSMUST00000086830 348 ntBASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 AC137871.4-201ENSMUST00000226323 3901 ntBASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 AC121094.1-201ENSMUST00000224766 1345 ntBASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Gm5512-201ENSMUST00000218013 1353 ntBASIC5.88□□□□□ -1.47
H2afb2S4R1M3 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Gm37902-201ENSMUST00000192839 1683 ntBASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Gm14324-201ENSMUST00000121358 3051 ntBASIC5.88□□□□□ -1.47
H2afb2S4R1M3 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 AC144733.2-201ENSMUST00000222552 2292 ntBASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Gm13835-201ENSMUST00000118459 685 ntBASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Gm7658-201ENSMUST00000119064 1124 ntBASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Gm15618-201ENSMUST00000121610 452 ntBASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Gm25387-201ENSMUST00000157813 132 ntBASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Gm15970-201ENSMUST00000160623 834 ntBASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Gm28934-201ENSMUST00000186491 346 ntBASIC5.87□□□□□ -1.47
H2afb2S4R1M3 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Gm18444-201ENSMUST00000191239 629 ntBASIC5.87□□□□□ -1.47
H2afb2S4R1M3 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Gm42776-201ENSMUST00000198031 406 ntBASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Gm44219-201ENSMUST00000203005 273 ntBASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Gm44809-201ENSMUST00000208305 993 ntBASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 CU062626.1-201ENSMUST00000225248 505 ntBASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC5.87□□□□□ -1.47
H2afb2S4R1M3 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms