Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Mir5110-201ENSMUST00000175537 87 ntBASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Gm27030-201ENSMUST00000182551 464 ntBASIC5.62□□□□□ -1.51
Cdc40Q9DC48 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Gm37838-201ENSMUST00000194464 312 ntBASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 AC155941.1-201ENSMUST00000220223 529 ntBASIC5.62□□□□□ -1.51
Cdc40Q9DC48 AC119894.1-201ENSMUST00000220399 350 ntBASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Gm9292-201ENSMUST00000222008 710 ntBASIC5.62□□□□□ -1.51
Cdc40Q9DC48 CT030645.3-201ENSMUST00000225483 1022 ntBASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 n-R5s180-201ENSMUST00000082770 106 ntBASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.62□□□□□ -1.51
Cdc40Q9DC48 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm37951-201ENSMUST00000192963 3032 ntBASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm38377-201ENSMUST00000193253 3772 ntBASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm7146-201ENSMUST00000116079 739 ntBASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm15040-201ENSMUST00000118561 1241 ntBASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm13679-201ENSMUST00000118678 484 ntBASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm12388-201ENSMUST00000119112 1887 ntBASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm23553-201ENSMUST00000157817 295 ntBASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm23995-201ENSMUST00000158060 129 ntBASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm23225-201ENSMUST00000158121 114 ntBASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm16557-201ENSMUST00000159182 191 ntBASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm7152-201ENSMUST00000163570 605 ntBASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm15257-201ENSMUST00000177680 883 ntBASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm15252-201ENSMUST00000177750 883 ntBASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm15256-201ENSMUST00000177793 883 ntBASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm15260-201ENSMUST00000179402 883 ntBASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm6119-201ENSMUST00000193443 1206 ntBASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm42727-201ENSMUST00000202446 2823 ntBASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm9685-201ENSMUST00000211275 538 ntBASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm3785-201ENSMUST00000221000 202 ntBASIC5.61□□□□□ -1.51
Cdc40Q9DC48 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm10095-201ENSMUST00000222765 483 ntBASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 AC167013.5-201ENSMUST00000227597 2947 ntBASIC5.61□□□□□ -1.51
Cdc40Q9DC48 AC131033.2-201ENSMUST00000228138 1011 ntBASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Xpo7-203ENSMUST00000226448 3663 ntBASIC5.61□□□□□ -1.51
Cdc40Q9DC48 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC5.61□□□□□ -1.51
Cdc40Q9DC48 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Gm26146-201ENSMUST00000104478 185 ntBASIC5.6□□□□□ -1.51
Cdc40Q9DC48 n-R5s16-201ENSMUST00000104555 119 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms