Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Gm43900-201ENSMUST00000204868 2669 ntBASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 AC125328.1-201ENSMUST00000226812 2265 ntBASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Gm15332-201ENSMUST00000118386 357 ntBASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Gm13531-201ENSMUST00000121893 543 ntBASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 n-R5s19-201ENSMUST00000122793 120 ntBASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Gm10410-201ENSMUST00000180138 384 ntBASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Gm26898-201ENSMUST00000181678 384 ntBASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Vis1-201ENSMUST00000183957 201 ntBASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Gm27653-201ENSMUST00000185037 136 ntBASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Gm5692-201ENSMUST00000187254 1057 ntBASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Gm7832-201ENSMUST00000202613 880 ntBASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Gm44940-201ENSMUST00000206225 1247 ntBASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Gm45850-201ENSMUST00000212536 338 ntBASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 AC157085.1-201ENSMUST00000216343 162 ntBASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 AC155941.1-201ENSMUST00000220223 529 ntBASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 AC159208.1-201ENSMUST00000221403 649 ntBASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 AC154767.2-201ENSMUST00000224584 414 ntBASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 AC113198.1-201ENSMUST00000226353 832 ntBASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 AC122393.2-201ENSMUST00000226404 1093 ntBASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Gm15500-201ENSMUST00000071523 894 ntBASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Gm5321-201ENSMUST00000072050 447 ntBASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp2aQ9DB34 Gm11885-201ENSMUST00000118473 1428 ntBASIC6.16□□□□□ -1.42
Chmp2aQ9DB34 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
Chmp2aQ9DB34 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC6.16□□□□□ -1.42
Chmp2aQ9DB34 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.16□□□□□ -1.42
Chmp2aQ9DB34 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.16□□□□□ -1.42
Chmp2aQ9DB34 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Chmp2aQ9DB34 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp2aQ9DB34 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp2aQ9DB34 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp2aQ9DB34 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Chmp2aQ9DB34 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.16□□□□□ -1.42
Chmp2aQ9DB34 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Chmp2aQ9DB34 Gm14712-201ENSMUST00000120195 772 ntBASIC6.16□□□□□ -1.42
Chmp2aQ9DB34 Gm14970-201ENSMUST00000122289 355 ntBASIC6.16□□□□□ -1.42
Chmp2aQ9DB34 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC6.16□□□□□ -1.42
Chmp2aQ9DB34 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp2aQ9DB34 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC6.16□□□□□ -1.42
Chmp2aQ9DB34 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC6.16□□□□□ -1.42
Chmp2aQ9DB34 Gm36378-201ENSMUST00000201709 388 ntBASIC6.16□□□□□ -1.42
Chmp2aQ9DB34 Gm42581-201ENSMUST00000201774 966 ntBASIC6.16□□□□□ -1.42
Chmp2aQ9DB34 Gm18009-201ENSMUST00000203239 1016 ntBASIC6.16□□□□□ -1.42
Chmp2aQ9DB34 Gm6070-201ENSMUST00000207275 419 ntBASIC6.16□□□□□ -1.42
Chmp2aQ9DB34 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC6.16□□□□□ -1.42
Chmp2aQ9DB34 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp2aQ9DB34 AC129219.1-201ENSMUST00000224336 448 ntBASIC6.16□□□□□ -1.42
Chmp2aQ9DB34 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
Chmp2aQ9DB34 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms