Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 AC124569.3-201ENSMUST00000224860 1621 ntBASIC6.02□□□□□ -1.45
Sf3a3Q9D554 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Sf3a3Q9D554 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sf3a3Q9D554 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sf3a3Q9D554 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sf3a3Q9D554 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Sf3a3Q9D554 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Sf3a3Q9D554 Gm11516-201ENSMUST00000118450 1582 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm45311-201ENSMUST00000211086 1330 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm38137-201ENSMUST00000193735 1401 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm43162-201ENSMUST00000198292 1770 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 AC162908.1-201ENSMUST00000219164 4563 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm15366-201ENSMUST00000118433 1019 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm8312-201ENSMUST00000119380 618 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm22361-201ENSMUST00000158435 176 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm15740-201ENSMUST00000159703 1292 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm22923-201ENSMUST00000174952 110 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm23162-201ENSMUST00000175081 121 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm27804-201ENSMUST00000185135 119 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm42646-201ENSMUST00000202233 914 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm18012-201ENSMUST00000204558 773 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm18599-201ENSMUST00000206729 1125 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm6702-201ENSMUST00000208496 471 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm8637-201ENSMUST00000212919 1085 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm21089-201ENSMUST00000215843 325 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm19116-201ENSMUST00000218592 642 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 AC163743.1-201ENSMUST00000224309 270 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 AC122397.3-201ENSMUST00000227097 527 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 AC121912.1-201ENSMUST00000227525 1201 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 AC122459.3-201ENSMUST00000228508 1042 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Desi2-202ENSMUST00000069568 1193 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Mir425-201ENSMUST00000083645 85 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm42479-201ENSMUST00000198654 1356 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC6.01□□□□□ -1.45
Sf3a3Q9D554 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC6□□□□□ -1.45
Sf3a3Q9D554 Gm45793-201ENSMUST00000207900 1342 ntBASIC6□□□□□ -1.45
Sf3a3Q9D554 AC159624.1-201ENSMUST00000217762 1344 ntBASIC6□□□□□ -1.45
Sf3a3Q9D554 AC132465.1-201ENSMUST00000219938 1307 ntBASIC6□□□□□ -1.45
Sf3a3Q9D554 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6□□□□□ -1.45
Sf3a3Q9D554 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sf3a3Q9D554 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Sf3a3Q9D554 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6□□□□□ -1.45
Sf3a3Q9D554 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC6□□□□□ -1.45
Sf3a3Q9D554 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sf3a3Q9D554 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Sf3a3Q9D554 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sf3a3Q9D554 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
Sf3a3Q9D554 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
Sf3a3Q9D554 Gm38264-201ENSMUST00000194850 2032 ntBASIC6□□□□□ -1.45
Sf3a3Q9D554 Rnu11-201ENSMUST00000104135 134 ntBASIC6□□□□□ -1.45
Sf3a3Q9D554 Gm26422-201ENSMUST00000104276 132 ntBASIC6□□□□□ -1.45
Sf3a3Q9D554 Gm11864-201ENSMUST00000116179 1220 ntBASIC6□□□□□ -1.45
Sf3a3Q9D554 Gm13679-201ENSMUST00000118678 484 ntBASIC6□□□□□ -1.45
Sf3a3Q9D554 Gm13463-201ENSMUST00000119020 233 ntBASIC6□□□□□ -1.45
Sf3a3Q9D554 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms