Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm26488-201ENSMUST00000178225 79 ntBASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Gm23449-201ENSMUST00000179208 79 ntBASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Gm25221-201ENSMUST00000180051 79 ntBASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Ighv1-30-201ENSMUST00000194082 349 ntBASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Gm46364-201ENSMUST00000218548 319 ntBASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Gm8607-201ENSMUST00000221864 431 ntBASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 AC174797.4-201ENSMUST00000225510 347 ntBASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Gm42975-201ENSMUST00000200612 1491 ntBASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Gm23942-201ENSMUST00000101956 107 ntBASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Gm16511-201ENSMUST00000120019 564 ntBASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Gm14876-201ENSMUST00000120795 327 ntBASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Gm15740-201ENSMUST00000159703 1292 ntBASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Ighv8-3-201ENSMUST00000194985 295 ntBASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Gm44361-201ENSMUST00000197960 94 ntBASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Gm8479-201ENSMUST00000203825 718 ntBASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Gm44770-201ENSMUST00000205395 1264 ntBASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Gm18559-201ENSMUST00000208249 604 ntBASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Gm44954-201ENSMUST00000208513 227 ntBASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 AL837512.1-201ENSMUST00000223914 1073 ntBASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 AC122533.1-201ENSMUST00000225177 767 ntBASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Gm6419-201ENSMUST00000097166 429 ntBASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 CT009757.4-201ENSMUST00000221520 2541 ntBASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Ddx56Q9D0R4 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm2223-201ENSMUST00000112099 1350 ntBASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm14976-201ENSMUST00000117055 1394 ntBASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm14589-201ENSMUST00000121640 727 ntBASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm26254-201ENSMUST00000122491 118 ntBASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms