Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Gm26289-201ENSMUST00000104169 131 ntBASIC6.02□□□□□ -1.45
Msh4Q99MT2 Gm15016-201ENSMUST00000117300 720 ntBASIC6.02□□□□□ -1.45
Msh4Q99MT2 Gm13338-201ENSMUST00000120235 361 ntBASIC6.02□□□□□ -1.45
Msh4Q99MT2 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Gm23903-201ENSMUST00000157566 131 ntBASIC6.02□□□□□ -1.45
Msh4Q99MT2 Gm22361-201ENSMUST00000158435 176 ntBASIC6.02□□□□□ -1.45
Msh4Q99MT2 Mir5107-201ENSMUST00000175586 88 ntBASIC6.02□□□□□ -1.45
Msh4Q99MT2 Mir7046-201ENSMUST00000183435 66 ntBASIC6.02□□□□□ -1.45
Msh4Q99MT2 Gm37376-201ENSMUST00000192176 453 ntBASIC6.02□□□□□ -1.45
Msh4Q99MT2 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Msh4Q99MT2 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC6.02□□□□□ -1.45
Msh4Q99MT2 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Gm44137-201ENSMUST00000203670 367 ntBASIC6.02□□□□□ -1.45
Msh4Q99MT2 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC6.02□□□□□ -1.45
Msh4Q99MT2 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Msh4Q99MT2 AC135353.1-201ENSMUST00000215330 630 ntBASIC6.02□□□□□ -1.45
Msh4Q99MT2 Gm18601-201ENSMUST00000220831 634 ntBASIC6.02□□□□□ -1.45
Msh4Q99MT2 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Gm14988-201ENSMUST00000117224 1548 ntBASIC6.02□□□□□ -1.45
Msh4Q99MT2 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Msh4Q99MT2 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.02□□□□□ -1.45
Msh4Q99MT2 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
Msh4Q99MT2 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.01□□□□□ -1.45
Msh4Q99MT2 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm38264-201ENSMUST00000194850 2032 ntBASIC6.01□□□□□ -1.45
Msh4Q99MT2 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm42685-201ENSMUST00000200378 2390 ntBASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm9521-201ENSMUST00000206656 1516 ntBASIC6.01□□□□□ -1.45
Msh4Q99MT2 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm14356-201ENSMUST00000118322 869 ntBASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm13506-201ENSMUST00000120391 1083 ntBASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm14054-201ENSMUST00000120744 704 ntBASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm12752-201ENSMUST00000121657 811 ntBASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm25047-201ENSMUST00000122667 104 ntBASIC6.01□□□□□ -1.45
Msh4Q99MT2 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Msh4Q99MT2 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm25219-201ENSMUST00000157545 330 ntBASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC6.01□□□□□ -1.45
Msh4Q99MT2 n-R5s209-201ENSMUST00000179494 119 ntBASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Mir7685-201ENSMUST00000183555 62 ntBASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm29013-201ENSMUST00000187431 237 ntBASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm21742-201ENSMUST00000189352 548 ntBASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm4548-201ENSMUST00000208487 509 ntBASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm45789-201ENSMUST00000213038 364 ntBASIC6.01□□□□□ -1.45
Msh4Q99MT2 AC154481.1-201ENSMUST00000223532 331 ntBASIC6.01□□□□□ -1.45
Msh4Q99MT2 AC154642.1-201ENSMUST00000224173 740 ntBASIC6.01□□□□□ -1.45
Msh4Q99MT2 AC158521.1-202ENSMUST00000224352 645 ntBASIC6.01□□□□□ -1.45
Msh4Q99MT2 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.01□□□□□ -1.45
Msh4Q99MT2 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm22684-201ENSMUST00000082849 132 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms