Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm19764-201ENSMUST00000203630 649 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm19572-201ENSMUST00000214326 338 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm19174-201ENSMUST00000216944 956 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm18338-201ENSMUST00000222381 560 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm9267-201ENSMUST00000222831 404 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Clrn1Q8K445 AC116591.1-201ENSMUST00000227919 351 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 AC154838.1-201ENSMUST00000228944 911 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm5341-201ENSMUST00000058881 489 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Clrn1Q8K445 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Clrn1Q8K445 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Clrn1Q8K445 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Clrn1Q8K445 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm9226-201ENSMUST00000188352 3489 ntBASIC6.15□□□□□ -1.43
Clrn1Q8K445 Gm43880-201ENSMUST00000203635 2162 ntBASIC6.15□□□□□ -1.43
Clrn1Q8K445 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.15□□□□□ -1.43
Clrn1Q8K445 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Clrn1Q8K445 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.15□□□□□ -1.43
Clrn1Q8K445 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Clrn1Q8K445 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Clrn1Q8K445 Gm3883-201ENSMUST00000098119 3229 ntBASIC6.15□□□□□ -1.43
Clrn1Q8K445 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Clrn1Q8K445 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Clrn1Q8K445 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Clrn1Q8K445 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Clrn1Q8K445 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Clrn1Q8K445 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
Clrn1Q8K445 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Clrn1Q8K445 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.15□□□□□ -1.43
Clrn1Q8K445 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Clrn1Q8K445 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Clrn1Q8K445 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm45876-201ENSMUST00000212698 2709 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm6011-201ENSMUST00000211736 1796 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 AC153143.2-201ENSMUST00000220999 1804 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm14733-201ENSMUST00000117680 133 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm15216-201ENSMUST00000118058 277 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm14610-201ENSMUST00000118358 966 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm15616-201ENSMUST00000118662 375 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm15390-201ENSMUST00000120323 738 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm14847-201ENSMUST00000121978 519 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm12175-201ENSMUST00000122081 345 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm13724-201ENSMUST00000122395 1155 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm24592-201ENSMUST00000122505 106 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm23111-201ENSMUST00000122652 105 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Clrn1Q8K445 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm25550-201ENSMUST00000158079 128 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm23385-201ENSMUST00000158592 295 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Mir5617-201ENSMUST00000176786 57 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm28113-201ENSMUST00000188280 229 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm5511-201ENSMUST00000189380 802 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm7019-201ENSMUST00000194122 369 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Ighv8-3-201ENSMUST00000194985 295 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm9504-201ENSMUST00000196322 468 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm44265-201ENSMUST00000203631 465 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm8479-201ENSMUST00000203825 718 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm5324-201ENSMUST00000208115 476 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm18559-201ENSMUST00000208249 604 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm19137-201ENSMUST00000213790 1164 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms