Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm15332-201ENSMUST00000118386 357 ntBASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Gm13835-201ENSMUST00000118459 685 ntBASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Gm14580-201ENSMUST00000119122 718 ntBASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Gm13506-201ENSMUST00000120391 1083 ntBASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Gm12978-201ENSMUST00000121250 522 ntBASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Gm25117-201ENSMUST00000157194 144 ntBASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Gm16164-201ENSMUST00000160078 468 ntBASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Gm17137-202ENSMUST00000165729 957 ntBASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Gm17048-201ENSMUST00000179266 847 ntBASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Gm9088-201ENSMUST00000220237 508 ntBASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Gm24200-201ENSMUST00000082955 157 ntBASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Gm22971-201ENSMUST00000083305 97 ntBASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Gm9930-201ENSMUST00000066742 3151 ntBASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Gm18880-201ENSMUST00000223333 1541 ntBASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 AC158605.3-201ENSMUST00000218999 2538 ntBASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Gm26144-201ENSMUST00000104475 132 ntBASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Gm15018-201ENSMUST00000117090 633 ntBASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Gm5754-201ENSMUST00000118774 892 ntBASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Gm7927-201ENSMUST00000118818 880 ntBASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Gm12757-201ENSMUST00000119465 800 ntBASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Gm14369-201ENSMUST00000121355 285 ntBASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Snora47-201ENSMUST00000157483 138 ntBASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Gm26346-201ENSMUST00000157525 329 ntBASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Gm22636-201ENSMUST00000158142 275 ntBASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Gm37475-201ENSMUST00000193107 1015 ntBASIC7.3□□□□□ -1.24
Brf1Q8CFK2 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Gm31211-201ENSMUST00000199170 253 ntBASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Gm42824-201ENSMUST00000199361 247 ntBASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Gm5554-201ENSMUST00000199726 1206 ntBASIC7.3□□□□□ -1.24
Brf1Q8CFK2 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Gm5027-201ENSMUST00000206700 375 ntBASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Gm4083-201ENSMUST00000207158 451 ntBASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Gm18242-201ENSMUST00000218455 542 ntBASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC7.3□□□□□ -1.24
Brf1Q8CFK2 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC7.3□□□□□ -1.24
Brf1Q8CFK2 AC091783.3-201ENSMUST00000223969 681 ntBASIC7.3□□□□□ -1.24
Brf1Q8CFK2 AC154642.1-201ENSMUST00000224173 740 ntBASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Gm5229-201ENSMUST00000039375 354 ntBASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Brf1Q8CFK2 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Gm19210-201ENSMUST00000199562 1350 ntBASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Gm42611-201ENSMUST00000199446 3407 ntBASIC7.3□□□□□ -1.24
Brf1Q8CFK2 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Brf1Q8CFK2 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Brf1Q8CFK2 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Brf1Q8CFK2 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Brf1Q8CFK2 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Brf1Q8CFK2 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC7.29□□□□□ -1.24
Brf1Q8CFK2 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Brf1Q8CFK2 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Brf1Q8CFK2 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Brf1Q8CFK2 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Brf1Q8CFK2 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC7.29□□□□□ -1.24
Brf1Q8CFK2 Gm26474-201ENSMUST00000116762 122 ntBASIC7.29□□□□□ -1.24
Brf1Q8CFK2 Gm9005-201ENSMUST00000119908 607 ntBASIC7.29□□□□□ -1.24
Brf1Q8CFK2 Gm14515-201ENSMUST00000121327 216 ntBASIC7.29□□□□□ -1.24
Brf1Q8CFK2 Gm11233-201ENSMUST00000122357 634 ntBASIC7.29□□□□□ -1.24
Brf1Q8CFK2 Gm23903-201ENSMUST00000157566 131 ntBASIC7.29□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms