Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Mir5100-201ENSMUST00000174993 64 ntBASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Mir5617-201ENSMUST00000176786 57 ntBASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Gm5430-201ENSMUST00000182525 915 ntBASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Gm27186-201ENSMUST00000184223 307 ntBASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Mir7029-201ENSMUST00000184777 61 ntBASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Gm29156-201ENSMUST00000187764 499 ntBASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Gm37901-201ENSMUST00000195107 514 ntBASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Gm44896-201ENSMUST00000206190 772 ntBASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Gm7769-201ENSMUST00000212900 933 ntBASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 AC133598.4-201ENSMUST00000224577 454 ntBASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 CT009711.2-201ENSMUST00000225352 934 ntBASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 AC154563.1-201ENSMUST00000228317 442 ntBASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 AC122459.3-201ENSMUST00000228508 1042 ntBASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Olfr687-201ENSMUST00000098154 938 ntBASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Gm42507-201ENSMUST00000201187 2555 ntBASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Gm15696-201ENSMUST00000121730 445 ntBASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Gm16107-201ENSMUST00000162523 862 ntBASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Gm6541-201ENSMUST00000165542 561 ntBASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Gm20453-201ENSMUST00000173968 226 ntBASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Gm9285-201ENSMUST00000177691 697 ntBASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Gm26959-201ENSMUST00000182376 978 ntBASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Gm28973-201ENSMUST00000189310 613 ntBASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Gm37700-201ENSMUST00000192617 965 ntBASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Gm37719-201ENSMUST00000194615 292 ntBASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Gm9419-201ENSMUST00000200672 567 ntBASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Gm42581-201ENSMUST00000201774 966 ntBASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 AC114573.1-201ENSMUST00000224120 1210 ntBASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 AC123533.2-201ENSMUST00000228176 375 ntBASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Gm5229-201ENSMUST00000039375 354 ntBASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Gm24695-201ENSMUST00000083877 83 ntBASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Gm9575-201ENSMUST00000122140 1339 ntBASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Gm14896-201ENSMUST00000121311 1351 ntBASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Gm43328-201ENSMUST00000198544 1434 ntBASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Gm9408-201ENSMUST00000197375 1505 ntBASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Ccdc28bQ8CEG5 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Gm14126-201ENSMUST00000122345 395 ntBASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Mir1981-201ENSMUST00000157934 82 ntBASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Gm16269-201ENSMUST00000160532 409 ntBASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Gm9294-201ENSMUST00000165198 789 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms