Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trub1Q8C0D0 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trub1Q8C0D0 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trub1Q8C0D0 Gm5949-201ENSMUST00000213468 1421 ntBASIC6.07□□□□□ -1.44
Trub1Q8C0D0 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trub1Q8C0D0 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.07□□□□□ -1.44
Trub1Q8C0D0 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Gm42781-201ENSMUST00000201317 2719 ntBASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Gm23440-201ENSMUST00000104299 130 ntBASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Gm12322-201ENSMUST00000121605 389 ntBASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Gm23050-201ENSMUST00000158775 165 ntBASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Gm24733-201ENSMUST00000158863 253 ntBASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Gm26057-201ENSMUST00000178099 165 ntBASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Gm8183-201ENSMUST00000183134 980 ntBASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Vis1-201ENSMUST00000183957 201 ntBASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Gm37079-201ENSMUST00000194114 2135 ntBASIC6.06□□□□□ -1.44
Trub1Q8C0D0 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Gm42776-201ENSMUST00000198031 406 ntBASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Gm45082-201ENSMUST00000206082 601 ntBASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Gm4083-201ENSMUST00000207158 451 ntBASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Gm7802-201ENSMUST00000216464 262 ntBASIC6.06□□□□□ -1.44
Trub1Q8C0D0 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 AC154904.1-201ENSMUST00000219510 312 ntBASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Gm36262-201ENSMUST00000223274 499 ntBASIC6.06□□□□□ -1.44
Trub1Q8C0D0 AV026068-216ENSMUST00000223874 328 ntBASIC6.06□□□□□ -1.44
Trub1Q8C0D0 AC154767.2-201ENSMUST00000224584 414 ntBASIC6.06□□□□□ -1.44
Trub1Q8C0D0 CU062626.1-201ENSMUST00000225248 505 ntBASIC6.06□□□□□ -1.44
Trub1Q8C0D0 AC125405.1-201ENSMUST00000226406 589 ntBASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 AC130827.1-201ENSMUST00000220476 3850 ntBASIC6.06□□□□□ -1.44
Trub1Q8C0D0 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Gm19210-201ENSMUST00000199562 1350 ntBASIC6.06□□□□□ -1.44
Trub1Q8C0D0 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Gm37078-201ENSMUST00000193314 2009 ntBASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Gm16007-201ENSMUST00000117837 286 ntBASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Gm26106-201ENSMUST00000157254 228 ntBASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Gm26410-201ENSMUST00000157670 261 ntBASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Gm23279-201ENSMUST00000157912 97 ntBASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Mir3060-201ENSMUST00000175339 83 ntBASIC6.05□□□□□ -1.44
Trub1Q8C0D0 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Gm37430-201ENSMUST00000193039 196 ntBASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms