Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm44950-201ENSMUST00000206403 2296 ntBASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Mir1932-201ENSMUST00000157390 90 ntBASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Gm16027-201ENSMUST00000161618 758 ntBASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Gm17212-201ENSMUST00000166666 259 ntBASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Gm4956-202ENSMUST00000178869 672 ntBASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Gm8392-201ENSMUST00000185647 835 ntBASIC12.5□□□□□ -0.41
Trim41Q5NCC3 AC099934.1-201ENSMUST00000200493 79 ntBASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim41Q5NCC3 AC124184.1-201ENSMUST00000218167 283 ntBASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Gm3089-201ENSMUST00000200804 1395 ntBASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Gm3302-201ENSMUST00000201462 1395 ntBASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Gm38300-201ENSMUST00000194245 1870 ntBASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim41Q5NCC3 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Klf10-202ENSMUST00000226363 2917 ntBASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Naca-202ENSMUST00000092048 6745 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Gm22256-201ENSMUST00000102291 107 ntBASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Gm12740-201ENSMUST00000118794 308 ntBASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Gm12924-201ENSMUST00000121747 318 ntBASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Scarna6-201ENSMUST00000158656 265 ntBASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Gm25246-201ENSMUST00000175476 69 ntBASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Gm28801-201ENSMUST00000188761 449 ntBASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Gm8924-201ENSMUST00000197405 1132 ntBASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Gm21040-201ENSMUST00000199493 1132 ntBASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Gm19457-201ENSMUST00000200995 448 ntBASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Gm45026-201ENSMUST00000205292 833 ntBASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim41Q5NCC3 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC12.49□□□□□ -0.41
Trim41Q5NCC3 AC156790.1-201ENSMUST00000226572 559 ntBASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Gm38386-201ENSMUST00000194293 3421 ntBASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim41Q5NCC3 Gm37043-201ENSMUST00000194609 3105 ntBASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim41Q5NCC3 AC122769.1-201ENSMUST00000226930 1714 ntBASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Tenm1-201ENSMUST00000016294 8365 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Gm24608-201ENSMUST00000104381 136 ntBASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Gm24069-201ENSMUST00000104512 127 ntBASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Gm25724-201ENSMUST00000104531 117 ntBASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Gm14293-201ENSMUST00000118528 577 ntBASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Gm15157-201ENSMUST00000121852 702 ntBASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Gm26323-201ENSMUST00000157743 175 ntBASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Gm36638-201ENSMUST00000193295 400 ntBASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Gm20770-201ENSMUST00000193474 694 ntBASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Gm44623-201ENSMUST00000207934 434 ntBASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Gm34424-201ENSMUST00000213400 782 ntBASIC12.48□□□□□ -0.41
Trim41Q5NCC3 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim41Q5NCC3 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC12.48□□□□□ -0.41
Trim41Q5NCC3 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms