Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm18880-201ENSMUST00000223333 1541 ntBASIC6.59□□□□□ -1.35
CiitaP79621 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.59□□□□□ -1.35
CiitaP79621 Gm37238-201ENSMUST00000195552 2390 ntBASIC6.59□□□□□ -1.35
CiitaP79621 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
CiitaP79621 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
CiitaP79621 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CiitaP79621 AC158595.1-201ENSMUST00000217989 1435 ntBASIC6.59□□□□□ -1.36
CiitaP79621 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
CiitaP79621 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CiitaP79621 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CiitaP79621 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CiitaP79621 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
CiitaP79621 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CiitaP79621 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CiitaP79621 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CiitaP79621 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CiitaP79621 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CiitaP79621 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CiitaP79621 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CiitaP79621 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CiitaP79621 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.58□□□□□ -1.36
CiitaP79621 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CiitaP79621 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CiitaP79621 Gm13771-201ENSMUST00000117988 238 ntBASIC6.58□□□□□ -1.36
CiitaP79621 Gm14842-201ENSMUST00000119577 269 ntBASIC6.58□□□□□ -1.36
CiitaP79621 Gm9428-201ENSMUST00000127214 769 ntBASIC6.58□□□□□ -1.36
CiitaP79621 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC6.58□□□□□ -1.36
CiitaP79621 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CiitaP79621 Gm9671-201ENSMUST00000171502 547 ntBASIC6.58□□□□□ -1.36
CiitaP79621 Gm21399-201ENSMUST00000180210 597 ntBASIC6.58□□□□□ -1.36
CiitaP79621 Gm5430-201ENSMUST00000182525 915 ntBASIC6.58□□□□□ -1.36
CiitaP79621 Mir7211-201ENSMUST00000184071 63 ntBASIC6.58□□□□□ -1.36
CiitaP79621 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC6.58□□□□□ -1.36
CiitaP79621 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.58□□□□□ -1.36
CiitaP79621 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CiitaP79621 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.58□□□□□ -1.36
CiitaP79621 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC6.58□□□□□ -1.36
CiitaP79621 Gm18413-201ENSMUST00000221573 655 ntBASIC6.58□□□□□ -1.36
CiitaP79621 AL671874.1-201ENSMUST00000223746 1123 ntBASIC6.58□□□□□ -1.36
CiitaP79621 AC162183.1-202ENSMUST00000225434 904 ntBASIC6.58□□□□□ -1.36
CiitaP79621 AC164302.1-201ENSMUST00000227036 433 ntBASIC6.58□□□□□ -1.36
CiitaP79621 AC170810.1-201ENSMUST00000228267 672 ntBASIC6.58□□□□□ -1.36
CiitaP79621 AC122035.2-201ENSMUST00000228698 462 ntBASIC6.58□□□□□ -1.36
CiitaP79621 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CiitaP79621 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CiitaP79621 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
CiitaP79621 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
CiitaP79621 Gm18066-201ENSMUST00000210904 1774 ntBASIC6.58□□□□□ -1.36
CiitaP79621 BC055308-201ENSMUST00000193380 2538 ntBASIC6.58□□□□□ -1.36
CiitaP79621 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CiitaP79621 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CiitaP79621 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CiitaP79621 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
CiitaP79621 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC6.58□□□□□ -1.36
CiitaP79621 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CiitaP79621 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CiitaP79621 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.58□□□□□ -1.36
CiitaP79621 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CiitaP79621 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CiitaP79621 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CiitaP79621 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CiitaP79621 AC122769.3-201ENSMUST00000227739 3245 ntBASIC6.57□□□□□ -1.36
CiitaP79621 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CiitaP79621 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CiitaP79621 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CiitaP79621 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CiitaP79621 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CiitaP79621 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.57□□□□□ -1.36
CiitaP79621 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CiitaP79621 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.57□□□□□ -1.36
CiitaP79621 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
CiitaP79621 Gm12077-201ENSMUST00000117049 364 ntBASIC6.57□□□□□ -1.36
CiitaP79621 Gm14382-201ENSMUST00000117374 437 ntBASIC6.57□□□□□ -1.36
CiitaP79621 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC6.57□□□□□ -1.36
CiitaP79621 Gm14783-201ENSMUST00000118900 663 ntBASIC6.57□□□□□ -1.36
CiitaP79621 Gm14115-201ENSMUST00000119242 482 ntBASIC6.57□□□□□ -1.36
CiitaP79621 Gm11533-201ENSMUST00000120287 477 ntBASIC6.57□□□□□ -1.36
CiitaP79621 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC6.57□□□□□ -1.36
CiitaP79621 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CiitaP79621 Gm13440-201ENSMUST00000121665 496 ntBASIC6.57□□□□□ -1.36
CiitaP79621 Gm14970-201ENSMUST00000122289 355 ntBASIC6.57□□□□□ -1.36
CiitaP79621 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
CiitaP79621 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC6.57□□□□□ -1.36
CiitaP79621 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CiitaP79621 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC6.57□□□□□ -1.36
CiitaP79621 Gm24685-201ENSMUST00000157764 285 ntBASIC6.57□□□□□ -1.36
CiitaP79621 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.57□□□□□ -1.36
CiitaP79621 Gm22932-201ENSMUST00000175510 72 ntBASIC6.57□□□□□ -1.36
CiitaP79621 Gm23450-201ENSMUST00000178285 91 ntBASIC6.57□□□□□ -1.36
CiitaP79621 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
CiitaP79621 Gm6055-201ENSMUST00000180532 378 ntBASIC6.57□□□□□ -1.36
CiitaP79621 Gm3650-201ENSMUST00000180600 747 ntBASIC6.57□□□□□ -1.36
CiitaP79621 Gm37436-201ENSMUST00000193842 1085 ntBASIC6.57□□□□□ -1.36
CiitaP79621 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC6.57□□□□□ -1.36
CiitaP79621 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CiitaP79621 n-TStga1-201ENSMUST00000199903 109 ntBASIC6.57□□□□□ -1.36
CiitaP79621 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC6.57□□□□□ -1.36
CiitaP79621 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC6.57□□□□□ -1.36
CiitaP79621 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
CiitaP79621 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms