Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC6.2□□□□□ -1.42
Sf3b6P59708 Gm38146-201ENSMUST00000194121 1293 ntBASIC6.2□□□□□ -1.42
Sf3b6P59708 Gm9236-201ENSMUST00000196892 587 ntBASIC6.2□□□□□ -1.42
Sf3b6P59708 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sf3b6P59708 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sf3b6P59708 Gm42573-201ENSMUST00000202327 478 ntBASIC6.2□□□□□ -1.42
Sf3b6P59708 Gm21054-201ENSMUST00000203981 380 ntBASIC6.2□□□□□ -1.42
Sf3b6P59708 Gm44604-201ENSMUST00000205475 496 ntBASIC6.2□□□□□ -1.42
Sf3b6P59708 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC6.2□□□□□ -1.42
Sf3b6P59708 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC6.2□□□□□ -1.42
Sf3b6P59708 Gm34424-201ENSMUST00000213400 782 ntBASIC6.2□□□□□ -1.42
Sf3b6P59708 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sf3b6P59708 Gm19011-201ENSMUST00000221777 808 ntBASIC6.2□□□□□ -1.42
Sf3b6P59708 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sf3b6P59708 AC156576.2-202ENSMUST00000222525 411 ntBASIC6.2□□□□□ -1.42
Sf3b6P59708 Mif-ps7-201ENSMUST00000223357 327 ntBASIC6.2□□□□□ -1.42
Sf3b6P59708 CT010472.1-201ENSMUST00000224000 704 ntBASIC6.2□□□□□ -1.42
Sf3b6P59708 AC129935.1-201ENSMUST00000226302 873 ntBASIC6.2□□□□□ -1.42
Sf3b6P59708 AC155314.1-201ENSMUST00000227624 508 ntBASIC6.2□□□□□ -1.42
Sf3b6P59708 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Sf3b6P59708 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Sf3b6P59708 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Sf3b6P59708 Gm23846-201ENSMUST00000083835 107 ntBASIC6.2□□□□□ -1.42
Sf3b6P59708 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC6.2□□□□□ -1.42
Sf3b6P59708 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Sf3b6P59708 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sf3b6P59708 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sf3b6P59708 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC6.2□□□□□ -1.42
Sf3b6P59708 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sf3b6P59708 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Sf3b6P59708 AC159188.2-201ENSMUST00000224103 1301 ntBASIC6.2□□□□□ -1.42
Sf3b6P59708 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
Sf3b6P59708 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sf3b6P59708 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Sf3b6P59708 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC6.19□□□□□ -1.42
Sf3b6P59708 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sf3b6P59708 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sf3b6P59708 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.19□□□□□ -1.42
Sf3b6P59708 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sf3b6P59708 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
Sf3b6P59708 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sf3b6P59708 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Sf3b6P59708 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sf3b6P59708 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Sf3b6P59708 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Sf3b6P59708 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Sf3b6P59708 AC160029.1-201ENSMUST00000219628 2678 ntBASIC6.19□□□□□ -1.42
Sf3b6P59708 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sf3b6P59708 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sf3b6P59708 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sf3b6P59708 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Sf3b6P59708 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sf3b6P59708 Gm22091-201ENSMUST00000116908 127 ntBASIC6.19□□□□□ -1.42
Sf3b6P59708 Gm22152-201ENSMUST00000116966 125 ntBASIC6.19□□□□□ -1.42
Sf3b6P59708 Gm10241-201ENSMUST00000117664 286 ntBASIC6.19□□□□□ -1.42
Sf3b6P59708 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC6.19□□□□□ -1.42
Sf3b6P59708 Gm14607-201ENSMUST00000119119 491 ntBASIC6.19□□□□□ -1.42
Sf3b6P59708 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Sf3b6P59708 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.19□□□□□ -1.42
Sf3b6P59708 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC6.19□□□□□ -1.42
Sf3b6P59708 Gm11759-201ENSMUST00000121742 464 ntBASIC6.19□□□□□ -1.42
Sf3b6P59708 Gm14212-201ENSMUST00000122023 826 ntBASIC6.19□□□□□ -1.42
Sf3b6P59708 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sf3b6P59708 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC6.19□□□□□ -1.42
Sf3b6P59708 Gm23891-201ENSMUST00000158114 138 ntBASIC6.19□□□□□ -1.42
Sf3b6P59708 Gm8837-201ENSMUST00000161037 1107 ntBASIC6.19□□□□□ -1.42
Sf3b6P59708 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sf3b6P59708 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sf3b6P59708 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Sf3b6P59708 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
Sf3b6P59708 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Sf3b6P59708 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC6.19□□□□□ -1.42
Sf3b6P59708 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Sf3b6P59708 Gm21430-201ENSMUST00000182998 998 ntBASIC6.19□□□□□ -1.42
Sf3b6P59708 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Sf3b6P59708 Gm27236-201ENSMUST00000184147 442 ntBASIC6.19□□□□□ -1.42
Sf3b6P59708 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sf3b6P59708 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC6.19□□□□□ -1.42
Sf3b6P59708 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sf3b6P59708 Gm37550-201ENSMUST00000193230 463 ntBASIC6.19□□□□□ -1.42
Sf3b6P59708 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC6.19□□□□□ -1.42
Sf3b6P59708 Igkv12-47-201ENSMUST00000196961 356 ntBASIC6.19□□□□□ -1.42
Sf3b6P59708 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC6.19□□□□□ -1.42
Sf3b6P59708 Gm44623-201ENSMUST00000207934 434 ntBASIC6.19□□□□□ -1.42
Sf3b6P59708 Gm45478-201ENSMUST00000209472 211 ntBASIC6.19□□□□□ -1.42
Sf3b6P59708 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Sf3b6P59708 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC6.19□□□□□ -1.42
Sf3b6P59708 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC6.19□□□□□ -1.42
Sf3b6P59708 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sf3b6P59708 Gm7392-201ENSMUST00000217815 345 ntBASIC6.19□□□□□ -1.42
Sf3b6P59708 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC6.19□□□□□ -1.42
Sf3b6P59708 Gm46231-201ENSMUST00000220152 314 ntBASIC6.19□□□□□ -1.42
Sf3b6P59708 AC140930.4-201ENSMUST00000220750 150 ntBASIC6.19□□□□□ -1.42
Sf3b6P59708 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sf3b6P59708 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.19□□□□□ -1.42
Sf3b6P59708 AC125019.1-201ENSMUST00000224809 908 ntBASIC6.19□□□□□ -1.42
Sf3b6P59708 AC158981.3-202ENSMUST00000228906 523 ntBASIC6.19□□□□□ -1.42
Sf3b6P59708 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sf3b6P59708 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sf3b6P59708 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 162.5 ms