Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.62□□□□□ -1.51
Tnfsf4P43488 Gm37883-201ENSMUST00000194970 725 ntBASIC5.62□□□□□ -1.51
Tnfsf4P43488 Gm44494-201ENSMUST00000196760 129 ntBASIC5.62□□□□□ -1.51
Tnfsf4P43488 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.62□□□□□ -1.51
Tnfsf4P43488 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Tnfsf4P43488 Gm43222-201ENSMUST00000199013 603 ntBASIC5.62□□□□□ -1.51
Tnfsf4P43488 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC5.62□□□□□ -1.51
Tnfsf4P43488 Gm44219-201ENSMUST00000203005 273 ntBASIC5.62□□□□□ -1.51
Tnfsf4P43488 Gm44252-201ENSMUST00000204187 330 ntBASIC5.62□□□□□ -1.51
Tnfsf4P43488 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Tnfsf4P43488 Gm18329-201ENSMUST00000215832 589 ntBASIC5.62□□□□□ -1.51
Tnfsf4P43488 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Tnfsf4P43488 AC163621.1-201ENSMUST00000220695 379 ntBASIC5.62□□□□□ -1.51
Tnfsf4P43488 AC170810.1-201ENSMUST00000228267 672 ntBASIC5.62□□□□□ -1.51
Tnfsf4P43488 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Tnfsf4P43488 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Tnfsf4P43488 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Tnfsf4P43488 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.62□□□□□ -1.51
Tnfsf4P43488 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Tnfsf4P43488 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Tnfsf4P43488 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC5.62□□□□□ -1.51
Tnfsf4P43488 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Tnfsf4P43488 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Tnfsf4P43488 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.62□□□□□ -1.51
Tnfsf4P43488 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.62□□□□□ -1.51
Tnfsf4P43488 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC5.62□□□□□ -1.51
Tnfsf4P43488 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Tnfsf4P43488 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.62□□□□□ -1.51
Tnfsf4P43488 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Tnfsf4P43488 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Tnfsf4P43488 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Tnfsf4P43488 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Tnfsf4P43488 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.62□□□□□ -1.51
Tnfsf4P43488 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Tnfsf4P43488 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Tnfsf4P43488 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Tnfsf4P43488 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.61□□□□□ -1.51
Tnfsf4P43488 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Tnfsf4P43488 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.61□□□□□ -1.51
Tnfsf4P43488 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Tnfsf4P43488 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Tnfsf4P43488 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Tnfsf4P43488 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Tnfsf4P43488 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Tnfsf4P43488 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Tnfsf4P43488 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Tnfsf4P43488 Gm11271-201ENSMUST00000116054 440 ntBASIC5.61□□□□□ -1.51
Tnfsf4P43488 Gm13311-201ENSMUST00000117863 379 ntBASIC5.61□□□□□ -1.51
Tnfsf4P43488 Gm14018-201ENSMUST00000119042 455 ntBASIC5.61□□□□□ -1.51
Tnfsf4P43488 Gm6884-201ENSMUST00000119318 615 ntBASIC5.61□□□□□ -1.51
Tnfsf4P43488 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.61□□□□□ -1.51
Tnfsf4P43488 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC5.61□□□□□ -1.51
Tnfsf4P43488 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC5.61□□□□□ -1.51
Tnfsf4P43488 Gm21399-201ENSMUST00000180210 597 ntBASIC5.61□□□□□ -1.51
Tnfsf4P43488 Gm19124-201ENSMUST00000191041 832 ntBASIC5.61□□□□□ -1.51
Tnfsf4P43488 Gm4322-201ENSMUST00000191094 336 ntBASIC5.61□□□□□ -1.51
Tnfsf4P43488 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.61□□□□□ -1.51
Tnfsf4P43488 Gm2367-201ENSMUST00000192374 472 ntBASIC5.61□□□□□ -1.51
Tnfsf4P43488 Gm36936-201ENSMUST00000194508 2749 ntBASIC5.61□□□□□ -1.51
Tnfsf4P43488 Gm43343-201ENSMUST00000202454 1926 ntBASIC5.61□□□□□ -1.51
Tnfsf4P43488 Gm10688-201ENSMUST00000214985 520 ntBASIC5.61□□□□□ -1.51
Tnfsf4P43488 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Tnfsf4P43488 Gm18620-201ENSMUST00000222295 324 ntBASIC5.61□□□□□ -1.51
Tnfsf4P43488 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.61□□□□□ -1.51
Tnfsf4P43488 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.61□□□□□ -1.51
Tnfsf4P43488 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Tnfsf4P43488 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Tnfsf4P43488 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Tnfsf4P43488 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.61□□□□□ -1.51
Tnfsf4P43488 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Tnfsf4P43488 Gm24032-201ENSMUST00000083932 159 ntBASIC5.61□□□□□ -1.51
Tnfsf4P43488 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Tnfsf4P43488 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Tnfsf4P43488 Gm37127-201ENSMUST00000192924 3036 ntBASIC5.61□□□□□ -1.51
Tnfsf4P43488 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
Tnfsf4P43488 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Tnfsf4P43488 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
Tnfsf4P43488 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Tnfsf4P43488 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Tnfsf4P43488 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Tnfsf4P43488 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Tnfsf4P43488 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Tnfsf4P43488 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Tnfsf4P43488 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Tnfsf4P43488 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Tnfsf4P43488 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Tnfsf4P43488 Mir449c-201ENSMUST00000102192 109 ntBASIC5.6□□□□□ -1.51
Tnfsf4P43488 Gm25345-201ENSMUST00000104505 133 ntBASIC5.6□□□□□ -1.51
Tnfsf4P43488 Gm24069-201ENSMUST00000104512 127 ntBASIC5.6□□□□□ -1.51
Tnfsf4P43488 Gm13768-201ENSMUST00000116469 929 ntBASIC5.6□□□□□ -1.51
Tnfsf4P43488 Gm15332-201ENSMUST00000118386 357 ntBASIC5.6□□□□□ -1.51
Tnfsf4P43488 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC5.6□□□□□ -1.51
Tnfsf4P43488 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Tnfsf4P43488 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Tnfsf4P43488 Gm22915-201ENSMUST00000157615 136 ntBASIC5.6□□□□□ -1.51
Tnfsf4P43488 Gm25989-201ENSMUST00000158761 133 ntBASIC5.6□□□□□ -1.51
Tnfsf4P43488 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC5.6□□□□□ -1.51
Tnfsf4P43488 Cfhr3-201ENSMUST00000170441 1022 ntBASIC5.6□□□□□ -1.51
Tnfsf4P43488 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Tnfsf4P43488 Mir6992-201ENSMUST00000183342 109 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 104.1 ms