Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm19093-201ENSMUST00000210671 1454 ntBASIC5.77□□□□□ -1.49
Cdx2P43241 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Cdx2P43241 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx2P43241 Gm37959-201ENSMUST00000191700 2897 ntBASIC5.77□□□□□ -1.49
Cdx2P43241 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Cdx2P43241 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx2P43241 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx2P43241 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Cdx2P43241 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Cdx2P43241 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Cdx2P43241 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Cdx2P43241 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.76□□□□□ -1.49
Cdx2P43241 AC022682.2-202ENSMUST00000224394 3943 ntBASIC5.76□□□□□ -1.49
Cdx2P43241 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Cdx2P43241 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx2P43241 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx2P43241 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx2P43241 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC5.76□□□□□ -1.49
Cdx2P43241 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC5.76□□□□□ -1.49
Cdx2P43241 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Cdx2P43241 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx2P43241 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
Cdx2P43241 Gm13537-201ENSMUST00000120467 267 ntBASIC5.76□□□□□ -1.49
Cdx2P43241 Gm22959-201ENSMUST00000122514 303 ntBASIC5.76□□□□□ -1.49
Cdx2P43241 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC5.76□□□□□ -1.49
Cdx2P43241 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx2P43241 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.76□□□□□ -1.49
Cdx2P43241 Gm22596-201ENSMUST00000157601 316 ntBASIC5.76□□□□□ -1.49
Cdx2P43241 Gm24236-201ENSMUST00000157794 134 ntBASIC5.76□□□□□ -1.49
Cdx2P43241 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC5.76□□□□□ -1.49
Cdx2P43241 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Cdx2P43241 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx2P43241 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.76□□□□□ -1.49
Cdx2P43241 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx2P43241 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Cdx2P43241 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Cdx2P43241 Gm26738-201ENSMUST00000181312 601 ntBASIC5.76□□□□□ -1.49
Cdx2P43241 Mir6903-201ENSMUST00000183597 88 ntBASIC5.76□□□□□ -1.49
Cdx2P43241 Vis1-201ENSMUST00000183957 201 ntBASIC5.76□□□□□ -1.49
Cdx2P43241 Gm27355-201ENSMUST00000185045 128 ntBASIC5.76□□□□□ -1.49
Cdx2P43241 Gm18444-201ENSMUST00000191239 629 ntBASIC5.76□□□□□ -1.49
Cdx2P43241 Gm37681-201ENSMUST00000193880 727 ntBASIC5.76□□□□□ -1.49
Cdx2P43241 Gm44316-201ENSMUST00000199274 97 ntBASIC5.76□□□□□ -1.49
Cdx2P43241 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC5.76□□□□□ -1.49
Cdx2P43241 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.76□□□□□ -1.49
Cdx2P43241 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
Cdx2P43241 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx2P43241 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Cdx2P43241 Gm24200-201ENSMUST00000082955 157 ntBASIC5.76□□□□□ -1.49
Cdx2P43241 Gm23238-201ENSMUST00000083007 164 ntBASIC5.76□□□□□ -1.49
Cdx2P43241 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.76□□□□□ -1.49
Cdx2P43241 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Cdx2P43241 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx2P43241 Gm20775-201ENSMUST00000100115 1851 ntBASIC5.76□□□□□ -1.49
Cdx2P43241 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx2P43241 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx2P43241 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
Cdx2P43241 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx2P43241 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Cdx2P43241 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx2P43241 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx2P43241 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Cdx2P43241 AC156163.1-201ENSMUST00000215598 3369 ntBASIC5.76□□□□□ -1.49
Cdx2P43241 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx2P43241 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Cdx2P43241 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
Cdx2P43241 Gm14245-201ENSMUST00000118939 1843 ntBASIC5.76□□□□□ -1.49
Cdx2P43241 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx2P43241 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
Cdx2P43241 AC159006.2-201ENSMUST00000228734 4144 ntBASIC5.76□□□□□ -1.49
Cdx2P43241 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx2P43241 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Cdx2P43241 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx2P43241 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx2P43241 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx2P43241 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.75□□□□□ -1.49
Cdx2P43241 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx2P43241 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx2P43241 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx2P43241 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Cdx2P43241 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Cdx2P43241 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx2P43241 Gm6744-201ENSMUST00000119303 543 ntBASIC5.75□□□□□ -1.49
Cdx2P43241 Gm14106-201ENSMUST00000119382 438 ntBASIC5.75□□□□□ -1.49
Cdx2P43241 Gm11485-201ENSMUST00000120048 1175 ntBASIC5.75□□□□□ -1.49
Cdx2P43241 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx2P43241 Gm15970-201ENSMUST00000160623 834 ntBASIC5.75□□□□□ -1.49
Cdx2P43241 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdx2P43241 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC5.75□□□□□ -1.49
Cdx2P43241 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC5.75□□□□□ -1.49
Cdx2P43241 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx2P43241 Gm8367-201ENSMUST00000186145 887 ntBASIC5.75□□□□□ -1.49
Cdx2P43241 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdx2P43241 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Cdx2P43241 Gm38015-201ENSMUST00000193048 188 ntBASIC5.75□□□□□ -1.49
Cdx2P43241 Gm37774-201ENSMUST00000194401 245 ntBASIC5.75□□□□□ -1.49
Cdx2P43241 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.75□□□□□ -1.49
Cdx2P43241 Gm44432-201ENSMUST00000203342 938 ntBASIC5.75□□□□□ -1.49
Cdx2P43241 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC5.75□□□□□ -1.49
Cdx2P43241 Gm45596-201ENSMUST00000209279 434 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms