Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC6.35□□□□□ -1.39
LdlrP35951 Gm5928-201ENSMUST00000221839 466 ntBASIC6.35□□□□□ -1.39
LdlrP35951 AC131187.2-201ENSMUST00000223936 994 ntBASIC6.35□□□□□ -1.39
LdlrP35951 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.35□□□□□ -1.39
LdlrP35951 AC114572.1-201ENSMUST00000227262 300 ntBASIC6.35□□□□□ -1.39
LdlrP35951 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.35□□□□□ -1.39
LdlrP35951 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.35□□□□□ -1.39
LdlrP35951 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LdlrP35951 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LdlrP35951 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LdlrP35951 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LdlrP35951 Gm22351-201ENSMUST00000083925 107 ntBASIC6.35□□□□□ -1.39
LdlrP35951 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
LdlrP35951 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LdlrP35951 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LdlrP35951 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LdlrP35951 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LdlrP35951 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
LdlrP35951 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
LdlrP35951 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
LdlrP35951 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC6.35□□□□□ -1.39
LdlrP35951 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.35□□□□□ -1.39
LdlrP35951 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
LdlrP35951 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LdlrP35951 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
LdlrP35951 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
LdlrP35951 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
LdlrP35951 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LdlrP35951 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LdlrP35951 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LdlrP35951 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LdlrP35951 Gm14896-201ENSMUST00000121311 1351 ntBASIC6.34□□□□□ -1.39
LdlrP35951 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
LdlrP35951 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
LdlrP35951 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LdlrP35951 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
LdlrP35951 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
LdlrP35951 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC6.34□□□□□ -1.39
LdlrP35951 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LdlrP35951 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
LdlrP35951 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LdlrP35951 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
LdlrP35951 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
LdlrP35951 Gm14375-201ENSMUST00000119490 855 ntBASIC6.34□□□□□ -1.39
LdlrP35951 Gm15311-201ENSMUST00000119682 282 ntBASIC6.34□□□□□ -1.39
LdlrP35951 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC6.34□□□□□ -1.39
LdlrP35951 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
LdlrP35951 Gm15305-201ENSMUST00000120354 288 ntBASIC6.34□□□□□ -1.39
LdlrP35951 Gm13357-201ENSMUST00000120528 537 ntBASIC6.34□□□□□ -1.39
LdlrP35951 Gm11925-201ENSMUST00000121375 535 ntBASIC6.34□□□□□ -1.39
LdlrP35951 Gm13502-201ENSMUST00000121574 684 ntBASIC6.34□□□□□ -1.39
LdlrP35951 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.34□□□□□ -1.39
LdlrP35951 Gm5456-201ENSMUST00000170706 844 ntBASIC6.34□□□□□ -1.39
LdlrP35951 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
LdlrP35951 Gm17045-201ENSMUST00000178600 844 ntBASIC6.34□□□□□ -1.39
LdlrP35951 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LdlrP35951 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LdlrP35951 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.34□□□□□ -1.39
LdlrP35951 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LdlrP35951 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC6.34□□□□□ -1.39
LdlrP35951 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC6.34□□□□□ -1.39
LdlrP35951 Gm37511-201ENSMUST00000192901 294 ntBASIC6.34□□□□□ -1.39
LdlrP35951 Gm36965-201ENSMUST00000193797 394 ntBASIC6.34□□□□□ -1.39
LdlrP35951 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC6.34□□□□□ -1.39
LdlrP35951 Gm35570-201ENSMUST00000198730 681 ntBASIC6.34□□□□□ -1.39
LdlrP35951 Gm43116-201ENSMUST00000199789 195 ntBASIC6.34□□□□□ -1.39
LdlrP35951 Gm42796-201ENSMUST00000199913 1087 ntBASIC6.34□□□□□ -1.39
LdlrP35951 Trav12-4-201ENSMUST00000200663 271 ntBASIC6.34□□□□□ -1.39
LdlrP35951 Gm7463-201ENSMUST00000201541 547 ntBASIC6.34□□□□□ -1.39
LdlrP35951 Gm43629-201ENSMUST00000201782 704 ntBASIC6.34□□□□□ -1.39
LdlrP35951 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC6.34□□□□□ -1.39
LdlrP35951 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC6.34□□□□□ -1.39
LdlrP35951 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC6.34□□□□□ -1.39
LdlrP35951 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.34□□□□□ -1.39
LdlrP35951 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC6.34□□□□□ -1.39
LdlrP35951 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LdlrP35951 AC154851.2-201ENSMUST00000222172 644 ntBASIC6.34□□□□□ -1.39
LdlrP35951 Gm5374-202ENSMUST00000222910 314 ntBASIC6.34□□□□□ -1.39
LdlrP35951 AC168880.1-201ENSMUST00000225113 707 ntBASIC6.34□□□□□ -1.39
LdlrP35951 AC130673.2-201ENSMUST00000228091 797 ntBASIC6.34□□□□□ -1.39
LdlrP35951 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
LdlrP35951 Gm22971-201ENSMUST00000083305 97 ntBASIC6.34□□□□□ -1.39
LdlrP35951 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.34□□□□□ -1.39
LdlrP35951 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
LdlrP35951 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LdlrP35951 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
LdlrP35951 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LdlrP35951 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.34□□□□□ -1.39
LdlrP35951 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
LdlrP35951 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
LdlrP35951 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
LdlrP35951 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LdlrP35951 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
LdlrP35951 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LdlrP35951 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LdlrP35951 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
LdlrP35951 Gm42852-201ENSMUST00000202649 1379 ntBASIC6.33□□□□□ -1.4
LdlrP35951 Gm9597-202ENSMUST00000227632 1387 ntBASIC6.33□□□□□ -1.4
LdlrP35951 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
LdlrP35951 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 149 ms