Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gm9529-201ENSMUST00000177598 579 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm23550-201ENSMUST00000179003 121 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm25123-201ENSMUST00000179154 121 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm25353-201ENSMUST00000179366 121 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm22992-201ENSMUST00000179496 121 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm25892-201ENSMUST00000179867 121 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm24092-201ENSMUST00000180257 121 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm3650-201ENSMUST00000180600 747 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm27044-201ENSMUST00000183033 796 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm18348-201ENSMUST00000191227 820 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm19057-201ENSMUST00000194329 1197 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm4602-201ENSMUST00000203198 308 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC6.13□□□□□ -1.43
Hoxc11P31313 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxc11P31313 AC151904.3-201ENSMUST00000219266 895 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC6.13□□□□□ -1.43
Hoxc11P31313 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC6.13□□□□□ -1.43
Hoxc11P31313 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 AC161252.1-201ENSMUST00000225536 467 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 AC102139.1-201ENSMUST00000227000 251 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Hoxc11P31313 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxc11P31313 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxc11P31313 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxc11P31313 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxc11P31313 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxc11P31313 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm18491-201ENSMUST00000192492 1594 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Hoxc11P31313 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC6.13□□□□□ -1.43
Hoxc11P31313 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxc11P31313 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxc11P31313 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxc11P31313 AC121997.2-201ENSMUST00000228095 2294 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxc11P31313 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxc11P31313 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC6.12□□□□□ -1.43
Hoxc11P31313 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxc11P31313 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Hoxc11P31313 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.12□□□□□ -1.43
Hoxc11P31313 Gm8822-201ENSMUST00000118948 2347 ntBASIC6.12□□□□□ -1.43
Hoxc11P31313 Gm9208-201ENSMUST00000120468 948 ntBASIC6.12□□□□□ -1.43
Hoxc11P31313 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC6.12□□□□□ -1.43
Hoxc11P31313 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxc11P31313 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC6.12□□□□□ -1.43
Hoxc11P31313 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxc11P31313 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxc11P31313 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxc11P31313 Gm26486-201ENSMUST00000158021 110 ntBASIC6.12□□□□□ -1.43
Hoxc11P31313 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxc11P31313 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Hoxc11P31313 Mir5107-201ENSMUST00000175586 88 ntBASIC6.12□□□□□ -1.43
Hoxc11P31313 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC6.12□□□□□ -1.43
Hoxc11P31313 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxc11P31313 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxc11P31313 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC6.12□□□□□ -1.43
Hoxc11P31313 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.12□□□□□ -1.43
Hoxc11P31313 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxc11P31313 Gm37504-201ENSMUST00000192537 2374 ntBASIC6.12□□□□□ -1.43
Hoxc11P31313 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC6.12□□□□□ -1.43
Hoxc11P31313 Gm42510-201ENSMUST00000196470 2258 ntBASIC6.12□□□□□ -1.43
Hoxc11P31313 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxc11P31313 Gm42781-201ENSMUST00000201317 2719 ntBASIC6.12□□□□□ -1.43
Hoxc11P31313 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.12□□□□□ -1.43
Hoxc11P31313 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Hoxc11P31313 Gm6290-201ENSMUST00000207666 1158 ntBASIC6.12□□□□□ -1.43
Hoxc11P31313 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxc11P31313 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxc11P31313 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxc11P31313 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC6.12□□□□□ -1.43
Hoxc11P31313 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC6.12□□□□□ -1.43
Hoxc11P31313 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.12□□□□□ -1.43
Hoxc11P31313 Gm45514-201ENSMUST00000211531 689 ntBASIC6.12□□□□□ -1.43
Hoxc11P31313 AC112680.2-201ENSMUST00000213119 595 ntBASIC6.12□□□□□ -1.43
Hoxc11P31313 Gm18377-201ENSMUST00000215141 607 ntBASIC6.12□□□□□ -1.43
Hoxc11P31313 AC165292.1-201ENSMUST00000215218 620 ntBASIC6.12□□□□□ -1.43
Hoxc11P31313 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC6.12□□□□□ -1.43
Hoxc11P31313 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC6.12□□□□□ -1.43
Hoxc11P31313 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxc11P31313 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC6.12□□□□□ -1.43
Hoxc11P31313 AC124516.1-201ENSMUST00000221845 3544 ntBASIC6.12□□□□□ -1.43
Hoxc11P31313 AL671874.1-201ENSMUST00000223746 1123 ntBASIC6.12□□□□□ -1.43
Hoxc11P31313 AC158521.1-202ENSMUST00000224352 645 ntBASIC6.12□□□□□ -1.43
Hoxc11P31313 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Hoxc11P31313 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.12□□□□□ -1.43
Hoxc11P31313 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Hoxc11P31313 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Hoxc11P31313 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Hoxc11P31313 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Hoxc11P31313 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxc11P31313 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Hoxc11P31313 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxc11P31313 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxc11P31313 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxc11P31313 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 105.5 ms