Protein–RNA interactions for Protein: P28700

Rxra, Retinoic acid receptor RXR-alpha, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxraP28700 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RxraP28700 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.23□□□□□ -1.41
RxraP28700 Gm15425-201ENSMUST00000119013 2711 ntBASIC6.23□□□□□ -1.41
RxraP28700 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
RxraP28700 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
RxraP28700 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC6.23□□□□□ -1.41
RxraP28700 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC6.23□□□□□ -1.41
RxraP28700 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
RxraP28700 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RxraP28700 AC164107.1-202ENSMUST00000228953 1816 ntBASIC6.22□□□□□ -1.41
RxraP28700 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RxraP28700 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RxraP28700 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
RxraP28700 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.22□□□□□ -1.41
RxraP28700 Gm38190-201ENSMUST00000192350 4755 ntBASIC6.22□□□□□ -1.41
RxraP28700 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.22□□□□□ -1.41
RxraP28700 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.22□□□□□ -1.41
RxraP28700 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RxraP28700 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
RxraP28700 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RxraP28700 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
RxraP28700 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
RxraP28700 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
RxraP28700 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
RxraP28700 Gm13193-201ENSMUST00000117275 225 ntBASIC6.22□□□□□ -1.41
RxraP28700 Gm15780-201ENSMUST00000121283 935 ntBASIC6.22□□□□□ -1.41
RxraP28700 Gm2986-201ENSMUST00000121603 382 ntBASIC6.22□□□□□ -1.41
RxraP28700 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.22□□□□□ -1.41
RxraP28700 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC6.22□□□□□ -1.41
RxraP28700 Gm22214-201ENSMUST00000157563 172 ntBASIC6.22□□□□□ -1.41
RxraP28700 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC6.22□□□□□ -1.41
RxraP28700 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.22□□□□□ -1.41
RxraP28700 Gm24561-201ENSMUST00000175182 95 ntBASIC6.22□□□□□ -1.41
RxraP28700 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC6.22□□□□□ -1.41
RxraP28700 Gm37631-201ENSMUST00000192275 364 ntBASIC6.22□□□□□ -1.41
RxraP28700 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC6.22□□□□□ -1.41
RxraP28700 Gm43354-201ENSMUST00000196862 346 ntBASIC6.22□□□□□ -1.41
RxraP28700 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RxraP28700 Gm17824-201ENSMUST00000197690 805 ntBASIC6.22□□□□□ -1.41
RxraP28700 Gm22897-202ENSMUST00000197782 127 ntBASIC6.22□□□□□ -1.41
RxraP28700 Gm44075-201ENSMUST00000204208 216 ntBASIC6.22□□□□□ -1.41
RxraP28700 Gm8291-201ENSMUST00000209635 1261 ntBASIC6.22□□□□□ -1.41
RxraP28700 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.22□□□□□ -1.41
RxraP28700 Gm11360-201ENSMUST00000221898 262 ntBASIC6.22□□□□□ -1.41
RxraP28700 AC123534.1-201ENSMUST00000224060 656 ntBASIC6.22□□□□□ -1.41
RxraP28700 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.22□□□□□ -1.41
RxraP28700 AC154640.3-201ENSMUST00000227492 846 ntBASIC6.22□□□□□ -1.41
RxraP28700 AC131100.2-201ENSMUST00000227701 998 ntBASIC6.22□□□□□ -1.41
RxraP28700 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.22□□□□□ -1.41
RxraP28700 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
RxraP28700 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RxraP28700 Mir7b-201ENSMUST00000083557 111 ntBASIC6.22□□□□□ -1.41
RxraP28700 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
RxraP28700 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.22□□□□□ -1.41
RxraP28700 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
RxraP28700 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RxraP28700 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RxraP28700 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.22□□□□□ -1.41
RxraP28700 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
RxraP28700 Gm37079-201ENSMUST00000194114 2135 ntBASIC6.22□□□□□ -1.41
RxraP28700 AC154354.1-201ENSMUST00000224585 2109 ntBASIC6.22□□□□□ -1.41
RxraP28700 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
RxraP28700 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
RxraP28700 AC154630.1-201ENSMUST00000215334 2440 ntBASIC6.21□□□□□ -1.41
RxraP28700 Fam26d-202ENSMUST00000218239 3075 ntBASIC6.21□□□□□ -1.42
RxraP28700 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RxraP28700 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC6.21□□□□□ -1.42
RxraP28700 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.21□□□□□ -1.42
RxraP28700 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
RxraP28700 Gm26289-201ENSMUST00000104169 131 ntBASIC6.21□□□□□ -1.42
RxraP28700 Gm25415-201ENSMUST00000104220 132 ntBASIC6.21□□□□□ -1.42
RxraP28700 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RxraP28700 Gm12939-201ENSMUST00000117303 165 ntBASIC6.21□□□□□ -1.42
RxraP28700 Gm14173-201ENSMUST00000117690 278 ntBASIC6.21□□□□□ -1.42
RxraP28700 Gm12442-201ENSMUST00000118372 338 ntBASIC6.21□□□□□ -1.42
RxraP28700 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
RxraP28700 Gm9208-201ENSMUST00000120468 948 ntBASIC6.21□□□□□ -1.42
RxraP28700 Gm7350-201ENSMUST00000120964 636 ntBASIC6.21□□□□□ -1.42
RxraP28700 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RxraP28700 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RxraP28700 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC6.21□□□□□ -1.42
RxraP28700 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RxraP28700 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RxraP28700 Gm12504-202ENSMUST00000148026 306 ntBASIC6.21□□□□□ -1.42
RxraP28700 Gm25904-201ENSMUST00000158491 143 ntBASIC6.21□□□□□ -1.42
RxraP28700 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
RxraP28700 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RxraP28700 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
RxraP28700 Gm28614-201ENSMUST00000186483 458 ntBASIC6.21□□□□□ -1.42
RxraP28700 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC6.21□□□□□ -1.42
RxraP28700 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC6.21□□□□□ -1.42
RxraP28700 Gm43561-201ENSMUST00000199866 448 ntBASIC6.21□□□□□ -1.42
RxraP28700 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC6.21□□□□□ -1.42
RxraP28700 Gm17834-201ENSMUST00000204322 891 ntBASIC6.21□□□□□ -1.42
RxraP28700 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.21□□□□□ -1.42
RxraP28700 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC6.21□□□□□ -1.42
RxraP28700 Gm18599-201ENSMUST00000206729 1125 ntBASIC6.21□□□□□ -1.42
RxraP28700 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC6.21□□□□□ -1.42
RxraP28700 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
RxraP28700 Gm18103-201ENSMUST00000216621 779 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms