Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC6.1□□□□□ -1.43
Hoxd3P09027 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm9750-201ENSMUST00000142025 2017 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd3P09027 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd3P09027 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 Mir763-201ENSMUST00000103249 120 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Hoxd3P09027 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd3P09027 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm11922-201ENSMUST00000118967 475 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm14998-201ENSMUST00000120502 495 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd3P09027 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm24901-201ENSMUST00000158125 110 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm24550-201ENSMUST00000158648 279 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm24738-201ENSMUST00000158856 123 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC6.1□□□□□ -1.43
Hoxd3P09027 Aste1-204ENSMUST00000167674 1227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd3P09027 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm26269-201ENSMUST00000180144 126 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm27999-201ENSMUST00000183539 193 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC6.1□□□□□ -1.43
Hoxd3P09027 Txn-ps1-201ENSMUST00000186385 309 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm28728-201ENSMUST00000189087 405 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm37418-201ENSMUST00000195031 274 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm42938-201ENSMUST00000198414 1072 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm43568-202ENSMUST00000198427 476 ntTSL 3 BASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC6.1□□□□□ -1.43
Hoxd3P09027 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm18995-201ENSMUST00000202981 520 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm44151-201ENSMUST00000204704 259 ntTSL 3 BASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm18207-201ENSMUST00000205486 526 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm29977-201ENSMUST00000206804 724 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd3P09027 AC069561.3-201ENSMUST00000217321 114 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC6.1□□□□□ -1.43
Hoxd3P09027 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.1□□□□□ -1.43
Hoxd3P09027 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC6.1□□□□□ -1.43
Hoxd3P09027 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC6.1□□□□□ -1.43
Hoxd3P09027 AC122533.2-201ENSMUST00000223772 545 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 AC161252.2-201ENSMUST00000224978 374 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 AC139569.1-201ENSMUST00000226080 614 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 Cma2-202ENSMUST00000228263 857 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 AC154484.2-201ENSMUST00000228359 818 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Hoxd3P09027 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC6.1□□□□□ -1.43
Hoxd3P09027 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd3P09027 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd3P09027 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd3P09027 5430420F09Rik-201ENSMUST00000194956 1799 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd3P09027 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd3P09027 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd3P09027 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd3P09027 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm37163-201ENSMUST00000195439 1690 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC6.1□□□□□ -1.43
Hoxd3P09027 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm6284-201ENSMUST00000209609 4287 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd3P09027 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Hoxd3P09027 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxd3P09027 Vegfd-201ENSMUST00000033751 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Il31ra-206ENSMUST00000224510 2946 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.43
Hoxd3P09027 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC6.09□□□□□ -1.43
Hoxd3P09027 Tm4sf1-202ENSMUST00000171384 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxd3P09027 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxd3P09027 Txnip-202ENSMUST00000074519 2827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxd3P09027 Olfr650-ps1-201ENSMUST00000121432 2321 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Hoxd3P09027 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxd3P09027 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.09□□□□□ -1.43
Hoxd3P09027 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Hoxd3P09027 AC122426.1-201ENSMUST00000214736 2235 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxd3P09027 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Hoxd3P09027 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxd3P09027 Jakmip2-201ENSMUST00000082254 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxd3P09027 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Hoxd3P09027 Umps-201ENSMUST00000023510 3484 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxd3P09027 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm24373-201ENSMUST00000104393 132 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm12344-201ENSMUST00000117087 329 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm15025-201ENSMUST00000118434 418 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm13835-201ENSMUST00000118459 685 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm13921-201ENSMUST00000119411 463 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm12189-201ENSMUST00000119779 912 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm11955-201ENSMUST00000119801 470 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm4992-201ENSMUST00000120256 768 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms