Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Scn3aA2ASI5 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
Scn3aA2ASI5 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.36
Scn3aA2ASI5 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Scn3aA2ASI5 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
Scn3aA2ASI5 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.36
Scn3aA2ASI5 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Gm1972-201ENSMUST00000181606 964 ntBASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Gm43516-201ENSMUST00000196891 322 ntBASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Gm17994-201ENSMUST00000209260 533 ntBASIC6.58□□□□□ -1.36
Scn3aA2ASI5 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.58□□□□□ -1.36
Scn3aA2ASI5 AC164618.3-201ENSMUST00000224863 681 ntBASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Gm15500-201ENSMUST00000071523 894 ntBASIC6.58□□□□□ -1.36
Scn3aA2ASI5 n-R5s215-201ENSMUST00000082480 104 ntBASIC6.58□□□□□ -1.36
Scn3aA2ASI5 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Gm38377-201ENSMUST00000193253 3772 ntBASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Scn3aA2ASI5 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.58□□□□□ -1.36
Scn3aA2ASI5 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Gm15073-201ENSMUST00000117432 634 ntBASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Gm13430-201ENSMUST00000121366 288 ntBASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Gm8826-201ENSMUST00000193161 948 ntBASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Gm8920-201ENSMUST00000196153 924 ntBASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC6.58□□□□□ -1.36
Scn3aA2ASI5 AC161884.2-201ENSMUST00000224513 227 ntBASIC6.58□□□□□ -1.36
Scn3aA2ASI5 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Gm9894-201ENSMUST00000171257 2904 ntBASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Gm11242-201ENSMUST00000120103 2457 ntBASIC6.58□□□□□ -1.36
Scn3aA2ASI5 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Gm12650-201ENSMUST00000121966 258 ntBASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Gm18705-201ENSMUST00000215985 913 ntBASIC6.57□□□□□ -1.36
Scn3aA2ASI5 AC124420.1-201ENSMUST00000219779 791 ntBASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Gm4012-201ENSMUST00000221504 581 ntBASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Gm38224-201ENSMUST00000191648 2100 ntBASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Gm38362-201ENSMUST00000192999 2064 ntBASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Gm10743-201ENSMUST00000219611 2358 ntBASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scn3aA2ASI5 AC122357.3-201ENSMUST00000221260 2293 ntBASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Gm44735-201ENSMUST00000206197 1752 ntBASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scn3aA2ASI5 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scn3aA2ASI5 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms