Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Rnu11-201ENSMUST00000104135 134 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Gm12573-201ENSMUST00000118158 286 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Gm14356-201ENSMUST00000118322 869 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Gm11920-201ENSMUST00000118491 563 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Gm5601-201ENSMUST00000118909 972 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Gm8430-201ENSMUST00000119780 471 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Gm13341-201ENSMUST00000120780 672 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Gm14353-201ENSMUST00000122200 869 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Gm22818-201ENSMUST00000157446 104 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Gm22817-201ENSMUST00000157448 356 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Gm23756-201ENSMUST00000157582 114 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Gm26037-201ENSMUST00000158150 311 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Gm23259-201ENSMUST00000158318 303 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Gm22690-201ENSMUST00000175054 110 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Gm44370-201ENSMUST00000175436 112 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Gm2229-201ENSMUST00000193328 710 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Gm18984-201ENSMUST00000193998 1124 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Gm37845-201ENSMUST00000194977 355 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Gm4548-201ENSMUST00000208487 509 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Gm20946-201ENSMUST00000212367 461 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC5.65□□□□□ -1.5
H2afb3S4R1G7 AC122371.2-201ENSMUST00000220583 366 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC5.65□□□□□ -1.5
H2afb3S4R1G7 AC105950.1-201ENSMUST00000222637 408 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 AC153646.1-201ENSMUST00000223229 1279 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 AC154481.1-201ENSMUST00000223532 331 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
H2afb3S4R1G7 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
H2afb3S4R1G7 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Gm26063-201ENSMUST00000083378 107 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Mir425-201ENSMUST00000083645 85 ntBASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
H2afb3S4R1G7 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
H2afb3S4R1G7 Gm10568-201ENSMUST00000193244 1634 ntBASIC5.65□□□□□ -1.51
H2afb3S4R1G7 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
H2afb3S4R1G7 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
H2afb3S4R1G7 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
H2afb3S4R1G7 Gm37864-201ENSMUST00000195308 3075 ntBASIC5.65□□□□□ -1.51
H2afb3S4R1G7 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
H2afb3S4R1G7 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
H2afb3S4R1G7 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
H2afb3S4R1G7 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
H2afb3S4R1G7 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
H2afb3S4R1G7 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm43503-201ENSMUST00000200033 3408 ntBASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm4991-201ENSMUST00000118899 1552 ntBASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.64□□□□□ -1.51
H2afb3S4R1G7 AC159476.1-201ENSMUST00000215914 1668 ntBASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm13735-201ENSMUST00000120217 670 ntBASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm11689-201ENSMUST00000120766 302 ntBASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm11925-201ENSMUST00000121375 535 ntBASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm26321-201ENSMUST00000157740 242 ntBASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm23082-201ENSMUST00000157852 133 ntBASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm3140-201ENSMUST00000163523 481 ntBASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm25675-201ENSMUST00000174979 118 ntBASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm23633-201ENSMUST00000175293 119 ntBASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm25617-201ENSMUST00000179548 133 ntBASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm29356-201ENSMUST00000186935 373 ntBASIC5.64□□□□□ -1.51
H2afb3S4R1G7 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm37770-201ENSMUST00000192855 772 ntBASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm18747-201ENSMUST00000198129 648 ntBASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm25617-202ENSMUST00000198387 132 ntBASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm42926-201ENSMUST00000200496 697 ntBASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm44865-201ENSMUST00000207240 531 ntBASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm18645-202ENSMUST00000212222 760 ntBASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC5.64□□□□□ -1.51
H2afb3S4R1G7 Gm4556-201ENSMUST00000217808 355 ntBASIC5.64□□□□□ -1.51
H2afb3S4R1G7 AC159297.2-201ENSMUST00000219567 1075 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 131.3 ms