Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Esd-ps-201ENSMUST00000170684 847 ntBASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Mir6362-201ENSMUST00000184329 107 ntBASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Gm29234-201ENSMUST00000187452 1262 ntBASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Gm412-201ENSMUST00000193360 948 ntBASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Ighv1-14-201ENSMUST00000194015 402 ntBASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Gm4083-201ENSMUST00000207158 451 ntBASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.71□□□□□ -1.5
Trim3Q9R1R2 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC5.71□□□□□ -1.5
Trim3Q9R1R2 AC073947.1-201ENSMUST00000216991 649 ntBASIC5.71□□□□□ -1.5
Trim3Q9R1R2 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Trim3Q9R1R2 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim3Q9R1R2 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Trim3Q9R1R2 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim3Q9R1R2 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.71□□□□□ -1.5
Trim3Q9R1R2 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm7108-201ENSMUST00000118038 3407 ntBASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm11290-204ENSMUST00000224688 3042 ntBASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Mir290a-201ENSMUST00000104627 83 ntBASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm25117-201ENSMUST00000157194 144 ntBASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm25660-201ENSMUST00000158470 104 ntBASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm23386-201ENSMUST00000158585 144 ntBASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm10177-201ENSMUST00000160052 444 ntBASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm20620-201ENSMUST00000177528 168 ntBASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm5947-201ENSMUST00000179156 714 ntBASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm5645-201ENSMUST00000179597 714 ntBASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm19124-201ENSMUST00000191041 832 ntBASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm6074-201ENSMUST00000193340 451 ntBASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm4332-201ENSMUST00000196114 346 ntBASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm3544-201ENSMUST00000196129 305 ntBASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm18863-201ENSMUST00000217004 1299 ntBASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm3266-201ENSMUST00000217832 591 ntBASIC5.7□□□□□ -1.5
Trim3Q9R1R2 AC134917.2-201ENSMUST00000223354 124 ntBASIC5.7□□□□□ -1.5
Trim3Q9R1R2 AC131029.2-201ENSMUST00000226696 628 ntBASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 n-R5s180-201ENSMUST00000082770 106 ntBASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm26063-201ENSMUST00000083378 107 ntBASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm38142-201ENSMUST00000194093 3555 ntBASIC5.7□□□□□ -1.5
Trim3Q9R1R2 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim3Q9R1R2 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Naip3-201ENSMUST00000118082 4208 ntBASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Gm44667-201ENSMUST00000207632 3337 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms