Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC8.51□□□□□ -1.05
Ube3bQ9ES34 Gm26321-201ENSMUST00000157740 242 ntBASIC8.51□□□□□ -1.05
Ube3bQ9ES34 Gm6434-201ENSMUST00000163316 372 ntBASIC8.51□□□□□ -1.05
Ube3bQ9ES34 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC8.51□□□□□ -1.05
Ube3bQ9ES34 S100a11-ps-201ENSMUST00000181735 306 ntBASIC8.51□□□□□ -1.05
Ube3bQ9ES34 Trbv22-201ENSMUST00000191697 291 ntBASIC8.51□□□□□ -1.05
Ube3bQ9ES34 Gm37353-201ENSMUST00000194497 313 ntBASIC8.51□□□□□ -1.05
Ube3bQ9ES34 Gm17834-201ENSMUST00000204322 891 ntBASIC8.51□□□□□ -1.05
Ube3bQ9ES34 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC8.51□□□□□ -1.05
Ube3bQ9ES34 Gm2221-201ENSMUST00000209342 418 ntBASIC8.51□□□□□ -1.05
Ube3bQ9ES34 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC8.51□□□□□ -1.05
Ube3bQ9ES34 Gm25512-201ENSMUST00000083863 107 ntBASIC8.51□□□□□ -1.05
Ube3bQ9ES34 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Ube3bQ9ES34 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Ube3bQ9ES34 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Ube3bQ9ES34 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Ube3bQ9ES34 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ube3bQ9ES34 Gm17101-201ENSMUST00000169520 1588 ntBASIC8.51□□□□□ -1.05
Ube3bQ9ES34 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ube3bQ9ES34 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ube3bQ9ES34 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Ube3bQ9ES34 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Ube3bQ9ES34 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Gm15108-201ENSMUST00000116160 803 ntBASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Gm16400-201ENSMUST00000116523 1029 ntBASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Gm13690-201ENSMUST00000118989 285 ntBASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Gm15157-201ENSMUST00000121852 702 ntBASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Gm15975-201ENSMUST00000122385 1402 ntBASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Gm25969-201ENSMUST00000157166 132 ntBASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Gm24286-201ENSMUST00000157632 128 ntBASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Gm24438-201ENSMUST00000157893 115 ntBASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Gm24534-201ENSMUST00000157949 291 ntBASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Gm27185-201ENSMUST00000184296 247 ntBASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Gm27178-201ENSMUST00000184962 340 ntBASIC8.5□□□□□ -1.05
Ube3bQ9ES34 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Gm18900-201ENSMUST00000193218 584 ntBASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Gm19089-201ENSMUST00000197207 613 ntBASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC8.5□□□□□ -1.05
Ube3bQ9ES34 CT010470.1-201ENSMUST00000225364 1876 ntBASIC8.5□□□□□ -1.05
Ube3bQ9ES34 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 AC131033.1-201ENSMUST00000228223 279 ntBASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Snora21-201ENSMUST00000082967 137 ntBASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Gm37304-201ENSMUST00000193833 2886 ntBASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC8.5□□□□□ -1.05
Ube3bQ9ES34 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ube3bQ9ES34 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC8.49□□□□□ -1.05
Ube3bQ9ES34 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ube3bQ9ES34 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ube3bQ9ES34 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ube3bQ9ES34 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC8.49□□□□□ -1.05
Ube3bQ9ES34 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ube3bQ9ES34 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ube3bQ9ES34 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ube3bQ9ES34 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ube3bQ9ES34 Gm38090-201ENSMUST00000195733 1942 ntBASIC8.49□□□□□ -1.05
Ube3bQ9ES34 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Ube3bQ9ES34 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC8.49□□□□□ -1.05
Ube3bQ9ES34 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ube3bQ9ES34 Gm13444-201ENSMUST00000119445 522 ntBASIC8.49□□□□□ -1.05
Ube3bQ9ES34 Gm12174-201ENSMUST00000119853 813 ntBASIC8.49□□□□□ -1.05
Ube3bQ9ES34 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC8.49□□□□□ -1.05
Ube3bQ9ES34 Gm13743-201ENSMUST00000121486 724 ntBASIC8.49□□□□□ -1.05
Ube3bQ9ES34 Gm14589-201ENSMUST00000121640 727 ntBASIC8.49□□□□□ -1.05
Ube3bQ9ES34 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ube3bQ9ES34 Gm22728-201ENSMUST00000158087 129 ntBASIC8.49□□□□□ -1.05
Ube3bQ9ES34 Gm23542-201ENSMUST00000158208 96 ntBASIC8.49□□□□□ -1.05
Ube3bQ9ES34 Gm17154-201ENSMUST00000165748 431 ntBASIC8.49□□□□□ -1.05
Ube3bQ9ES34 Gm24157-201ENSMUST00000175265 111 ntBASIC8.49□□□□□ -1.05
Ube3bQ9ES34 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Ube3bQ9ES34 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms