Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Gm6081-201ENSMUST00000134472 489 ntBASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Gm26487-201ENSMUST00000158022 94 ntBASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Gm8826-201ENSMUST00000193161 948 ntBASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Gm37477-201ENSMUST00000195215 884 ntBASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Gm2287-201ENSMUST00000197417 1084 ntBASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Gm42804-201ENSMUST00000199701 178 ntBASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Gm7452-201ENSMUST00000200764 788 ntBASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 AC069561.2-201ENSMUST00000217596 420 ntBASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 AC132384.13-201ENSMUST00000219556 1159 ntBASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 AC153152.2-201ENSMUST00000223165 959 ntBASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 AC154184.2-201ENSMUST00000225335 349 ntBASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Gm5446-201ENSMUST00000091762 784 ntBASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Gm43258-201ENSMUST00000200312 1950 ntBASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rnft1Q9DCN7 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Rnft1Q9DCN7 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Rnft1Q9DCN7 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.41
Rnft1Q9DCN7 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Rnft1Q9DCN7 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Rnft1Q9DCN7 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Rnft1Q9DCN7 Gm43880-201ENSMUST00000203635 2162 ntBASIC6.21□□□□□ -1.41
Rnft1Q9DCN7 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Rnft1Q9DCN7 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
Rnft1Q9DCN7 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.21□□□□□ -1.41
Rnft1Q9DCN7 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Rnft1Q9DCN7 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Gm13357-201ENSMUST00000120528 537 ntBASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Gm14728-201ENSMUST00000122196 492 ntBASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Gm15077-201ENSMUST00000122344 362 ntBASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Gm9359-201ENSMUST00000163721 1221 ntBASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Mir7029-201ENSMUST00000184777 61 ntBASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Gm29492-201ENSMUST00000187124 457 ntBASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Ighv1-17-201ENSMUST00000194435 350 ntBASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Gm43245-201ENSMUST00000197603 468 ntBASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Gm42938-201ENSMUST00000198414 1072 ntBASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Gm43005-201ENSMUST00000199015 648 ntBASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Gm45725-201ENSMUST00000212962 337 ntBASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Gm18892-201ENSMUST00000217628 881 ntBASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 CT009765.2-201ENSMUST00000221331 392 ntBASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 AC154636.3-201ENSMUST00000221489 1214 ntBASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 Gm19340-201ENSMUST00000221995 345 ntBASIC6.21□□□□□ -1.42
Rnft1Q9DCN7 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms