Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Gm38096-201ENSMUST00000193692 2389 ntBASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Gm21122-201ENSMUST00000191548 3452 ntBASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 AC164297.2-201ENSMUST00000224388 1508 ntBASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Dennd6a-204ENSMUST00000224248 2775 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Gm44697-201ENSMUST00000207756 1679 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Gm43637-201ENSMUST00000202206 2926 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 AC160028.2-201ENSMUST00000218937 2519 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Gm12985-201ENSMUST00000118376 183 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Gm15194-201ENSMUST00000120453 434 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Gm6081-201ENSMUST00000134472 489 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Gm23207-201ENSMUST00000158665 102 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Gm6055-201ENSMUST00000180532 378 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Gm27006-201ENSMUST00000182218 943 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Gm17934-201ENSMUST00000192818 422 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Gm7802-201ENSMUST00000216464 262 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 AC211878.6-201ENSMUST00000221896 358 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 AC129537.1-201ENSMUST00000226596 1228 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 AC122459.2-201ENSMUST00000227099 638 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 AC113269.1-201ENSMUST00000227185 674 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Gm22300-201ENSMUST00000082661 126 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Gm24454-201ENSMUST00000083349 132 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Mir298-201ENSMUST00000083476 82 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Olfr467-201ENSMUST00000084756 927 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Gm36947-201ENSMUST00000194709 2249 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Gm9521-201ENSMUST00000206656 1516 ntBASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Cdc40Q9DC48 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Gm45520-201ENSMUST00000210109 2031 ntBASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Gm11242-201ENSMUST00000120103 2457 ntBASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Gm14938-201ENSMUST00000119482 943 ntBASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Gm23954-201ENSMUST00000157213 353 ntBASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Gm16164-201ENSMUST00000160078 468 ntBASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Cdc40Q9DC48 Gm22690-201ENSMUST00000175054 110 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms