Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm15842-201ENSMUST00000120513 618 ntBASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm16463-201ENSMUST00000120527 721 ntBASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm23392-201ENSMUST00000157580 113 ntBASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm6726-201ENSMUST00000172786 681 ntBASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm23018-201ENSMUST00000177928 109 ntBASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm5473-201ENSMUST00000179326 642 ntBASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm27236-201ENSMUST00000184147 442 ntBASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm27332-201ENSMUST00000184893 112 ntBASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm21728-201ENSMUST00000188442 695 ntBASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm21889-201ENSMUST00000188487 695 ntBASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm20932-201ENSMUST00000189115 694 ntBASIC7.74□□□□□ -1.17
Trim11Q99PQ2 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm21920-201ENSMUST00000190042 695 ntBASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm20811-201ENSMUST00000190500 553 ntBASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm42883-201ENSMUST00000202594 222 ntBASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm5305-201ENSMUST00000204010 746 ntBASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm8209-201ENSMUST00000206386 553 ntBASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Olfr809-203ENSMUST00000218237 1100 ntBASIC7.74□□□□□ -1.17
Trim11Q99PQ2 AC107663.3-201ENSMUST00000225873 601 ntBASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Mir135a-1-201ENSMUST00000083473 90 ntBASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm43187-201ENSMUST00000200652 2397 ntBASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm29730-201ENSMUST00000192986 1396 ntBASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm25631-201ENSMUST00000104390 130 ntBASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm15159-201ENSMUST00000117062 764 ntBASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm12067-201ENSMUST00000119755 1148 ntBASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm12630-201ENSMUST00000121575 784 ntBASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm23633-201ENSMUST00000175293 119 ntBASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm27178-201ENSMUST00000184962 340 ntBASIC7.73□□□□□ -1.17
Trim11Q99PQ2 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm29263-201ENSMUST00000188718 463 ntBASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm28655-201ENSMUST00000191538 692 ntBASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm8891-201ENSMUST00000198546 832 ntBASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm43295-201ENSMUST00000201439 412 ntBASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm44088-201ENSMUST00000204595 237 ntBASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 130.5 ms