Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm7821-201ENSMUST00000117111 788 ntBASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm15621-201ENSMUST00000119162 364 ntBASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm16200-201ENSMUST00000120385 331 ntBASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm3810-201ENSMUST00000122413 476 ntBASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm7613-201ENSMUST00000139070 487 ntBASIC6.16□□□□□ -1.42
Clrn1Q8K445 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Clrn1Q8K445 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Clrn1Q8K445 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm25435-201ENSMUST00000158277 267 ntBASIC6.16□□□□□ -1.42
Clrn1Q8K445 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm10136-201ENSMUST00000183196 435 ntBASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm27155-201ENSMUST00000183716 898 ntBASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm27804-201ENSMUST00000185135 119 ntBASIC6.16□□□□□ -1.42
Clrn1Q8K445 Mir8097-201ENSMUST00000185150 119 ntBASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm29156-201ENSMUST00000187764 499 ntBASIC6.16□□□□□ -1.42
Clrn1Q8K445 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Clrn1Q8K445 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.16□□□□□ -1.42
Clrn1Q8K445 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm7587-201ENSMUST00000207618 1021 ntBASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm18586-201ENSMUST00000217265 518 ntBASIC6.16□□□□□ -1.42
Clrn1Q8K445 AC154573.2-201ENSMUST00000224174 378 ntBASIC6.16□□□□□ -1.42
Clrn1Q8K445 AC107663.1-201ENSMUST00000224257 468 ntBASIC6.16□□□□□ -1.42
Clrn1Q8K445 AC102676.1-201ENSMUST00000228131 719 ntBASIC6.16□□□□□ -1.42
Clrn1Q8K445 CT030662.3-201ENSMUST00000228751 476 ntBASIC6.16□□□□□ -1.42
Clrn1Q8K445 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm21731-201ENSMUST00000079524 489 ntBASIC6.16□□□□□ -1.42
Clrn1Q8K445 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm6419-201ENSMUST00000097166 429 ntBASIC6.16□□□□□ -1.42
Clrn1Q8K445 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 AC153143.1-201ENSMUST00000222966 1340 ntBASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 AC155710.1-201ENSMUST00000219913 1353 ntBASIC6.16□□□□□ -1.42
Clrn1Q8K445 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 AC154681.1-201ENSMUST00000225876 1735 ntBASIC6.16□□□□□ -1.42
Clrn1Q8K445 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Clrn1Q8K445 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Clrn1Q8K445 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Clrn1Q8K445 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Clrn1Q8K445 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Clrn1Q8K445 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Clrn1Q8K445 Igkv11-106-201ENSMUST00000103331 346 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm11105-201ENSMUST00000112781 478 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm4911-201ENSMUST00000119388 945 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm7746-201ENSMUST00000120966 503 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Clrn1Q8K445 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm23071-201ENSMUST00000158242 115 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm17043-201ENSMUST00000164621 1283 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm21772-201ENSMUST00000169213 478 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Samd15-201ENSMUST00000169669 1194 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm17126-201ENSMUST00000172276 523 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm18397-201ENSMUST00000176704 587 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm9285-201ENSMUST00000177691 697 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm21839-201ENSMUST00000179536 378 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm27295-201ENSMUST00000184264 153 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC6.15□□□□□ -1.42
Clrn1Q8K445 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm29576-201ENSMUST00000188020 678 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm28354-201ENSMUST00000190904 678 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm20926-201ENSMUST00000194457 696 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm38334-201ENSMUST00000195060 313 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm23011-202ENSMUST00000197855 275 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 Gm44353-201ENSMUST00000200618 138 ntBASIC6.15□□□□□ -1.42
Clrn1Q8K445 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms