Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Gm12308-201ENSMUST00000120440 389 ntBASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Gm6446-201ENSMUST00000120604 818 ntBASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Gm27512-201ENSMUST00000175328 126 ntBASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Gm21542-201ENSMUST00000182307 993 ntBASIC7.33□□□□□ -1.24
Brf1Q8CFK2 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Gm37709-201ENSMUST00000195074 600 ntBASIC7.33□□□□□ -1.24
Brf1Q8CFK2 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 AC211878.6-201ENSMUST00000221896 358 ntBASIC7.33□□□□□ -1.24
Brf1Q8CFK2 AC154851.2-201ENSMUST00000222172 644 ntBASIC7.33□□□□□ -1.24
Brf1Q8CFK2 AC164302.1-201ENSMUST00000227036 433 ntBASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Gm43395-201ENSMUST00000198717 2240 ntBASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 AC144772.2-201ENSMUST00000228830 2859 ntBASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Gm23311-201ENSMUST00000104152 134 ntBASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Gm13114-201ENSMUST00000117605 106 ntBASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Gm11833-201ENSMUST00000118393 853 ntBASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Gm13578-201ENSMUST00000120849 590 ntBASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Gm25047-201ENSMUST00000122667 104 ntBASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Mir1900-201ENSMUST00000122714 78 ntBASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Gm22600-201ENSMUST00000157598 269 ntBASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Gm37463-201ENSMUST00000193819 796 ntBASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Gm2429-201ENSMUST00000194635 586 ntBASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Gm36378-201ENSMUST00000201709 388 ntBASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Gm17994-201ENSMUST00000209260 533 ntBASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Gm10688-201ENSMUST00000214985 520 ntBASIC7.32□□□□□ -1.24
Brf1Q8CFK2 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 AC131187.2-201ENSMUST00000223936 994 ntBASIC7.32□□□□□ -1.24
Brf1Q8CFK2 AC131029.2-201ENSMUST00000226696 628 ntBASIC7.32□□□□□ -1.24
Brf1Q8CFK2 AC121912.1-201ENSMUST00000227525 1201 ntBASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Gm6990-201ENSMUST00000086830 348 ntBASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Olfr1143-201ENSMUST00000090708 945 ntBASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Gm21122-201ENSMUST00000191548 3452 ntBASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Gm42541-201ENSMUST00000199871 2249 ntBASIC7.32□□□□□ -1.24
Brf1Q8CFK2 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Brf1Q8CFK2 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC7.31□□□□□ -1.24
Brf1Q8CFK2 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC7.31□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms