Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sh3rf2Q8BZT2 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sh3rf2Q8BZT2 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.26□□□□□ -1.41
Sh3rf2Q8BZT2 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.26□□□□□ -1.41
Sh3rf2Q8BZT2 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sh3rf2Q8BZT2 AC103672.2-201ENSMUST00000228146 1687 ntBASIC6.26□□□□□ -1.41
Sh3rf2Q8BZT2 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sh3rf2Q8BZT2 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Gm18300-201ENSMUST00000192792 1406 ntBASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Gm37086-201ENSMUST00000193082 3452 ntBASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Gm22370-201ENSMUST00000102422 83 ntBASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Gm14957-201ENSMUST00000121069 817 ntBASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Gm12396-201ENSMUST00000121600 306 ntBASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Gm27030-201ENSMUST00000182551 464 ntBASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Gm27219-201ENSMUST00000184633 742 ntBASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Gm37072-201ENSMUST00000194570 837 ntBASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Gm36939-201ENSMUST00000194889 439 ntBASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Trav3n-2-201ENSMUST00000197693 334 ntBASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Gm43116-201ENSMUST00000199789 195 ntBASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Trav3d-2-201ENSMUST00000199874 334 ntBASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 n-TStga1-201ENSMUST00000199903 109 ntBASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Gm31861-201ENSMUST00000204563 672 ntBASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Gm44837-201ENSMUST00000206863 717 ntBASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Gm4510-201ENSMUST00000218265 427 ntBASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 AC153357.1-201ENSMUST00000219190 482 ntBASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Gm18628-201ENSMUST00000220584 475 ntBASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Gm9237-201ENSMUST00000221499 548 ntBASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 AC211878.1-201ENSMUST00000221668 474 ntBASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 AL645546.2-201ENSMUST00000224526 265 ntBASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 AC131117.1-201ENSMUST00000225154 1171 ntBASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 AC113198.1-201ENSMUST00000226353 832 ntBASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 AC129537.1-201ENSMUST00000226596 1228 ntBASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 n-R5s180-201ENSMUST00000082770 106 ntBASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Gm45172-201ENSMUST00000206054 1301 ntBASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf2Q8BZT2 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 AC153971.1-201ENSMUST00000215097 3811 ntBASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Gm15103-201ENSMUST00000119893 871 ntBASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Gm11255-201ENSMUST00000120448 1180 ntBASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Gm22985-201ENSMUST00000122754 116 ntBASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Gm22210-201ENSMUST00000158101 144 ntBASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Gm26169-201ENSMUST00000158420 135 ntBASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Gm24081-201ENSMUST00000175177 125 ntBASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Mir6992-201ENSMUST00000183342 109 ntBASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Mir6362-201ENSMUST00000184329 107 ntBASIC6.24□□□□□ -1.41
Sh3rf2Q8BZT2 Gm29111-201ENSMUST00000188823 696 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms