Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Gm15616-201ENSMUST00000118662 375 ntBASIC8.44□□□□□ -1.06
Usp40Q8BWR4 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Mir7037-201ENSMUST00000184414 65 ntBASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Gm43104-201ENSMUST00000197234 311 ntBASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Gm19060-201ENSMUST00000201959 421 ntBASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Gm44221-201ENSMUST00000203552 388 ntBASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC8.44□□□□□ -1.06
Usp40Q8BWR4 AC161426.1-201ENSMUST00000214137 286 ntBASIC8.44□□□□□ -1.06
Usp40Q8BWR4 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 AC159208.1-201ENSMUST00000221403 649 ntBASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Gm18413-201ENSMUST00000221573 655 ntBASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Gm5830-201ENSMUST00000049117 443 ntBASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Gm24200-201ENSMUST00000082955 157 ntBASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Gm43900-201ENSMUST00000204868 2669 ntBASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Gm14906-201ENSMUST00000119265 390 ntBASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Gm8215-201ENSMUST00000120627 990 ntBASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Gm14253-201ENSMUST00000122112 639 ntBASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Gm23553-201ENSMUST00000157817 295 ntBASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Gm24303-201ENSMUST00000178237 126 ntBASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Gm5268-201ENSMUST00000189212 940 ntBASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Gm38131-201ENSMUST00000192449 430 ntBASIC8.43□□□□□ -1.06
Usp40Q8BWR4 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Gm5318-201ENSMUST00000205249 406 ntBASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Gm19900-201ENSMUST00000207285 576 ntBASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp40Q8BWR4 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp40Q8BWR4 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Usp40Q8BWR4 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Gm14842-201ENSMUST00000119577 269 ntBASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Gm12115-201ENSMUST00000119969 447 ntBASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Gm8051-201ENSMUST00000120464 466 ntBASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Gm15530-201ENSMUST00000122206 555 ntBASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Gm14970-201ENSMUST00000122289 355 ntBASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC8.42□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms