Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Usp49Q6P9L4 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Usp49Q6P9L4 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Usp49Q6P9L4 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Mir290a-201ENSMUST00000104627 83 ntBASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Gm4234-201ENSMUST00000119747 714 ntBASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Gm7189-201ENSMUST00000119811 429 ntBASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Gm14776-201ENSMUST00000121029 887 ntBASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Gm13460-201ENSMUST00000121274 353 ntBASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Gm25065-201ENSMUST00000177914 132 ntBASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Gm25891-201ENSMUST00000180050 132 ntBASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Gm7832-201ENSMUST00000202613 880 ntBASIC6.75□□□□□ -1.33
Usp49Q6P9L4 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Gm18009-201ENSMUST00000203239 1016 ntBASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Gm44108-201ENSMUST00000203525 422 ntBASIC6.75□□□□□ -1.33
Usp49Q6P9L4 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 AC112680.2-201ENSMUST00000213119 595 ntBASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Gm7588-201ENSMUST00000216866 571 ntBASIC6.75□□□□□ -1.33
Usp49Q6P9L4 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Gm9088-201ENSMUST00000220237 508 ntBASIC6.75□□□□□ -1.33
Usp49Q6P9L4 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 AC154634.2-201ENSMUST00000225983 1184 ntBASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Usp49Q6P9L4 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Gm42968-201ENSMUST00000198578 1372 ntBASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Gm15040-201ENSMUST00000118561 1241 ntBASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Gm12507-201ENSMUST00000119155 415 ntBASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Gm7700-201ENSMUST00000120273 970 ntBASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Gm11879-201ENSMUST00000121885 702 ntBASIC6.74□□□□□ -1.33
Usp49Q6P9L4 n-R5s30-201ENSMUST00000122624 122 ntBASIC6.74□□□□□ -1.33
Usp49Q6P9L4 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Snora47-201ENSMUST00000157483 138 ntBASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Gm24687-201ENSMUST00000157758 241 ntBASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Gm25387-201ENSMUST00000157813 132 ntBASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Gm25332-201ENSMUST00000158038 105 ntBASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Gm37072-201ENSMUST00000194570 837 ntBASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Gm43929-201ENSMUST00000203025 409 ntBASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Gm18851-201ENSMUST00000210087 1058 ntBASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Gm45734-201ENSMUST00000211916 411 ntBASIC6.74□□□□□ -1.33
Usp49Q6P9L4 AC165292.1-201ENSMUST00000215218 620 ntBASIC6.74□□□□□ -1.33
Usp49Q6P9L4 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 AC134254.4-201ENSMUST00000223086 370 ntBASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Gm5229-201ENSMUST00000039375 354 ntBASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Gm25515-201ENSMUST00000083858 157 ntBASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Olfr519-201ENSMUST00000084752 960 ntBASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Usp49Q6P9L4 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms