Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gm24340-201ENSMUST00000104208 97 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gm22710-201ENSMUST00000116892 125 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gm12573-201ENSMUST00000118158 286 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gm11833-201ENSMUST00000118393 853 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gm11976-201ENSMUST00000119236 295 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gm4992-201ENSMUST00000120256 768 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Mir1953-201ENSMUST00000157866 89 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gm9064-201ENSMUST00000163579 566 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gm18358-201ENSMUST00000173179 1277 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gm18808-201ENSMUST00000173316 462 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gm31123-201ENSMUST00000192094 666 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gm19066-201ENSMUST00000193232 1078 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gm18748-201ENSMUST00000198507 622 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gm42799-201ENSMUST00000201331 328 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 AC161426.1-201ENSMUST00000214137 286 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 AC118230.1-201ENSMUST00000220196 656 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 AC123062.1-201ENSMUST00000221287 481 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 AC157654.1-201ENSMUST00000224130 820 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Vmn1r41-205ENSMUST00000227630 827 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 AC123917.1-201ENSMUST00000228063 1048 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 AC165437.1-201ENSMUST00000228640 536 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gm42503-201ENSMUST00000199080 3706 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.24□□□□□ -1.41
Usp39Q3TIX9 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Usp39Q3TIX9 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Snord88a-201ENSMUST00000116723 90 ntBASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Gm11350-201ENSMUST00000121436 870 ntBASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Gm12778-201ENSMUST00000122341 333 ntBASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Gm26486-201ENSMUST00000158021 110 ntBASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Gm8604-201ENSMUST00000183150 965 ntBASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Gm27715-201ENSMUST00000184714 260 ntBASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Gm28503-201ENSMUST00000185966 147 ntBASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC6.23□□□□□ -1.41
Usp39Q3TIX9 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Gm37285-201ENSMUST00000194465 1139 ntBASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Gm5309-201ENSMUST00000197416 677 ntBASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Gm31306-201ENSMUST00000197517 508 ntBASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Gm44253-201ENSMUST00000203387 628 ntBASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Usp39Q3TIX9 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms