Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm24790-201ENSMUST00000104285 132 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm15209-201ENSMUST00000117703 400 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm15216-201ENSMUST00000118058 277 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm12988-201ENSMUST00000119054 478 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm4992-201ENSMUST00000120256 768 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col8a1Q00780 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm7152-201ENSMUST00000163570 605 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm8224-201ENSMUST00000166178 497 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm20401-201ENSMUST00000173717 212 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm25246-201ENSMUST00000175476 69 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm15257-201ENSMUST00000177680 883 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm15252-201ENSMUST00000177750 883 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm15260-201ENSMUST00000179402 883 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col8a1Q00780 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm8209-201ENSMUST00000206386 553 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm44705-201ENSMUST00000206719 339 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm19032-201ENSMUST00000208584 592 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm45497-201ENSMUST00000211701 740 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm34424-201ENSMUST00000213400 782 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC5.89□□□□□ -1.47
Col8a1Q00780 AC079644.3-201ENSMUST00000222452 357 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm7252-201ENSMUST00000223284 456 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 CT030194.2-201ENSMUST00000225752 379 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 AC107663.3-201ENSMUST00000225873 601 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 CT009515.3-201ENSMUST00000226509 671 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 AC107757.1-201ENSMUST00000226780 357 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC5.89□□□□□ -1.47
Col8a1Q00780 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col8a1Q00780 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col8a1Q00780 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col8a1Q00780 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col8a1Q00780 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm42514-201ENSMUST00000196636 1832 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm20775-201ENSMUST00000100115 1851 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col8a1Q00780 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm38302-201ENSMUST00000191676 2076 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col8a1Q00780 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col8a1Q00780 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col8a1Q00780 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col8a1Q00780 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm45516-201ENSMUST00000211588 4182 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm43128-201ENSMUST00000202212 1621 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
Col8a1Q00780 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 AC154612.1-202ENSMUST00000224806 1725 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 AC158938.1-201ENSMUST00000225372 6720 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm15159-201ENSMUST00000117062 764 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm5793-201ENSMUST00000119393 630 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm12317-201ENSMUST00000122307 319 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm9428-201ENSMUST00000127214 769 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm24773-201ENSMUST00000158513 99 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm24228-201ENSMUST00000158829 129 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm6428-201ENSMUST00000161062 345 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm5611-201ENSMUST00000164523 852 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms