Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
PrkdcP97313 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PrkdcP97313 Gm38381-201ENSMUST00000193594 2275 ntBASIC3.95□□□□□ -1.78
PrkdcP97313 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
PrkdcP97313 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PrkdcP97313 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PrkdcP97313 Adgrl3-208ENSMUST00000118442 5101 ntTSL 5 BASIC3.95□□□□□ -1.78
PrkdcP97313 Gm42607-201ENSMUST00000200221 3393 ntBASIC3.95□□□□□ -1.78
PrkdcP97313 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PrkdcP97313 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC3.95□□□□□ -1.78
PrkdcP97313 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
PrkdcP97313 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PrkdcP97313 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PrkdcP97313 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PrkdcP97313 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
PrkdcP97313 Crebbp-205ENSMUST00000205765 7749 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
PrkdcP97313 Gm14656-201ENSMUST00000120342 502 ntBASIC3.95□□□□□ -1.78
PrkdcP97313 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC3.95□□□□□ -1.78
PrkdcP97313 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC3.95□□□□□ -1.78
PrkdcP97313 Gm21070-201ENSMUST00000182425 985 ntBASIC3.95□□□□□ -1.78
PrkdcP97313 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PrkdcP97313 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PrkdcP97313 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC3.95□□□□□ -1.78
PrkdcP97313 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PrkdcP97313 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PrkdcP97313 Eif2ak4-205ENSMUST00000110872 4907 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PrkdcP97313 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PrkdcP97313 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PrkdcP97313 Rimbp2-205ENSMUST00000199537 6966 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PrkdcP97313 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC3.95□□□□□ -1.78
PrkdcP97313 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PrkdcP97313 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
PrkdcP97313 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PrkdcP97313 AC164107.1-202ENSMUST00000228953 1816 ntBASIC3.95□□□□□ -1.78
PrkdcP97313 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
PrkdcP97313 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC3.95□□□□□ -1.78
PrkdcP97313 Gm14349-201ENSMUST00000137155 902 ntBASIC3.95□□□□□ -1.78
PrkdcP97313 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC3.95□□□□□ -1.78
PrkdcP97313 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
PrkdcP97313 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC3.95□□□□□ -1.78
PrkdcP97313 Gm45910-201ENSMUST00000212493 1003 ntBASIC3.95□□□□□ -1.78
PrkdcP97313 Gm18591-201ENSMUST00000220568 763 ntBASIC3.95□□□□□ -1.78
PrkdcP97313 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC3.95□□□□□ -1.78
PrkdcP97313 CT025689.2-201ENSMUST00000224979 429 ntBASIC3.95□□□□□ -1.78
PrkdcP97313 AC140288.1-201ENSMUST00000226329 503 ntBASIC3.95□□□□□ -1.78
PrkdcP97313 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
PrkdcP97313 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
PrkdcP97313 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC3.95□□□□□ -1.78
PrkdcP97313 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
PrkdcP97313 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PrkdcP97313 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PrkdcP97313 Ypel2-201ENSMUST00000018571 4847 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PrkdcP97313 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PrkdcP97313 Gm38156-201ENSMUST00000194601 2260 ntBASIC3.95□□□□□ -1.78
PrkdcP97313 Gm17101-201ENSMUST00000169520 1588 ntBASIC3.95□□□□□ -1.78
PrkdcP97313 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC3.95□□□□□ -1.78
PrkdcP97313 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
PrkdcP97313 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PrkdcP97313 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC3.95□□□□□ -1.78
PrkdcP97313 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PrkdcP97313 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
PrkdcP97313 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
PrkdcP97313 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC3.94□□□□□ -1.78
PrkdcP97313 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
PrkdcP97313 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC3.94□□□□□ -1.78
PrkdcP97313 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC3.94□□□□□ -1.78
PrkdcP97313 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC3.94□□□□□ -1.78
PrkdcP97313 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC3.94□□□□□ -1.78
PrkdcP97313 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PrkdcP97313 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC3.94□□□□□ -1.78
PrkdcP97313 Gm42646-201ENSMUST00000202233 914 ntBASIC3.94□□□□□ -1.78
PrkdcP97313 Prdm16-202ENSMUST00000070313 8429 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PrkdcP97313 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC3.94□□□□□ -1.78
PrkdcP97313 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
PrkdcP97313 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PrkdcP97313 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PrkdcP97313 AC156636.2-201ENSMUST00000218845 4557 ntBASIC3.94□□□□□ -1.78
PrkdcP97313 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PrkdcP97313 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC3.94□□□□□ -1.78
PrkdcP97313 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PrkdcP97313 Srgap1-202ENSMUST00000081688 7787 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
PrkdcP97313 Pkd1l2-201ENSMUST00000098375 7386 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
PrkdcP97313 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
PrkdcP97313 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PrkdcP97313 n-R5s82-201ENSMUST00000104213 109 ntBASIC3.94□□□□□ -1.78
PrkdcP97313 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PrkdcP97313 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PrkdcP97313 Gm14000-201ENSMUST00000118670 233 ntBASIC3.94□□□□□ -1.78
PrkdcP97313 Gm12466-201ENSMUST00000121199 620 ntBASIC3.94□□□□□ -1.78
PrkdcP97313 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PrkdcP97313 Gm21816-201ENSMUST00000179255 360 ntBASIC3.94□□□□□ -1.78
PrkdcP97313 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PrkdcP97313 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC3.94□□□□□ -1.78
PrkdcP97313 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PrkdcP97313 Gm43779-201ENSMUST00000196691 829 ntBASIC3.94□□□□□ -1.78
PrkdcP97313 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PrkdcP97313 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PrkdcP97313 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PrkdcP97313 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PrkdcP97313 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms