Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm20074-201ENSMUST00000208144 484 ntBASIC5.19□□□□□ -1.58
Pdlim4P70271 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC5.19□□□□□ -1.58
Pdlim4P70271 Gm45448-201ENSMUST00000211739 209 ntBASIC5.19□□□□□ -1.58
Pdlim4P70271 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Pdlim4P70271 AC154904.1-201ENSMUST00000219510 312 ntBASIC5.19□□□□□ -1.58
Pdlim4P70271 AC154527.3-201ENSMUST00000225519 989 ntBASIC5.19□□□□□ -1.58
Pdlim4P70271 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
Pdlim4P70271 AC121912.1-201ENSMUST00000227525 1201 ntBASIC5.19□□□□□ -1.58
Pdlim4P70271 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Pdlim4P70271 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Pdlim4P70271 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Pdlim4P70271 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Pdlim4P70271 Gm24032-201ENSMUST00000083932 159 ntBASIC5.19□□□□□ -1.58
Pdlim4P70271 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Pdlim4P70271 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC5.19□□□□□ -1.58
Pdlim4P70271 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.19□□□□□ -1.58
Pdlim4P70271 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Pdlim4P70271 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Pdlim4P70271 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Pdlim4P70271 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Pdlim4P70271 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Pdlim4P70271 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
Pdlim4P70271 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Pdlim4P70271 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Pdlim4P70271 Gm38105-201ENSMUST00000192112 2621 ntBASIC5.19□□□□□ -1.58
Pdlim4P70271 Gm42819-201ENSMUST00000199630 5121 ntBASIC5.19□□□□□ -1.58
Pdlim4P70271 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Pdlim4P70271 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Pdlim4P70271 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Pdlim4P70271 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Pdlim4P70271 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Pdlim4P70271 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Pdlim4P70271 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Pdlim4P70271 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Pdlim4P70271 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Pdlim4P70271 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Pdlim4P70271 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Pdlim4P70271 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Pdlim4P70271 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Pdlim4P70271 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Pdlim4P70271 Gm42676-201ENSMUST00000197609 2686 ntBASIC5.18□□□□□ -1.58
Pdlim4P70271 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
Pdlim4P70271 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Pdlim4P70271 Gm11271-201ENSMUST00000116054 440 ntBASIC5.18□□□□□ -1.58
Pdlim4P70271 Gm15765-201ENSMUST00000118407 910 ntBASIC5.18□□□□□ -1.58
Pdlim4P70271 Gm12757-201ENSMUST00000119465 800 ntBASIC5.18□□□□□ -1.58
Pdlim4P70271 Gm11609-201ENSMUST00000121926 793 ntBASIC5.18□□□□□ -1.58
Pdlim4P70271 Mir1903-201ENSMUST00000122574 80 ntBASIC5.18□□□□□ -1.58
Pdlim4P70271 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Pdlim4P70271 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Pdlim4P70271 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC5.18□□□□□ -1.58
Pdlim4P70271 Gm23467-201ENSMUST00000157127 159 ntBASIC5.18□□□□□ -1.58
Pdlim4P70271 Gm26167-201ENSMUST00000158423 253 ntBASIC5.18□□□□□ -1.58
Pdlim4P70271 Gm22428-201ENSMUST00000158554 132 ntBASIC5.18□□□□□ -1.58
Pdlim4P70271 Gm18808-201ENSMUST00000173316 462 ntBASIC5.18□□□□□ -1.58
Pdlim4P70271 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Pdlim4P70271 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC5.18□□□□□ -1.58
Pdlim4P70271 Gm9658-201ENSMUST00000182757 1012 ntBASIC5.18□□□□□ -1.58
Pdlim4P70271 Gm21614-201ENSMUST00000183260 1005 ntBASIC5.18□□□□□ -1.58
Pdlim4P70271 Mir6374-201ENSMUST00000184003 107 ntBASIC5.18□□□□□ -1.58
Pdlim4P70271 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Pdlim4P70271 Gm37560-201ENSMUST00000194289 1000 ntBASIC5.18□□□□□ -1.58
Pdlim4P70271 Gm3321-201ENSMUST00000200603 1129 ntBASIC5.18□□□□□ -1.58
Pdlim4P70271 Gm44422-201ENSMUST00000204142 1025 ntBASIC5.18□□□□□ -1.58
Pdlim4P70271 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC5.18□□□□□ -1.58
Pdlim4P70271 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC5.18□□□□□ -1.58
Pdlim4P70271 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Pdlim4P70271 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC5.18□□□□□ -1.58
Pdlim4P70271 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC5.18□□□□□ -1.58
Pdlim4P70271 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC5.18□□□□□ -1.58
Pdlim4P70271 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC5.18□□□□□ -1.58
Pdlim4P70271 AC165260.1-201ENSMUST00000224127 683 ntBASIC5.18□□□□□ -1.58
Pdlim4P70271 AC164295.1-201ENSMUST00000224861 186 ntBASIC5.18□□□□□ -1.58
Pdlim4P70271 AC159979.1-201ENSMUST00000227927 342 ntBASIC5.18□□□□□ -1.58
Pdlim4P70271 AC116319.2-201ENSMUST00000228159 984 ntBASIC5.18□□□□□ -1.58
Pdlim4P70271 AC133203.1-201ENSMUST00000228241 301 ntBASIC5.18□□□□□ -1.58
Pdlim4P70271 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Pdlim4P70271 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Pdlim4P70271 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Pdlim4P70271 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Pdlim4P70271 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Pdlim4P70271 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Pdlim4P70271 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Pdlim4P70271 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Pdlim4P70271 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Pdlim4P70271 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.18□□□□□ -1.58
Pdlim4P70271 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Pdlim4P70271 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Pdlim4P70271 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Pdlim4P70271 Gm43719-201ENSMUST00000200088 2199 ntBASIC5.18□□□□□ -1.58
Pdlim4P70271 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Pdlim4P70271 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Pdlim4P70271 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
Pdlim4P70271 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Pdlim4P70271 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Pdlim4P70271 Gm37079-201ENSMUST00000194114 2135 ntBASIC5.17□□□□□ -1.58
Pdlim4P70271 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Pdlim4P70271 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Pdlim4P70271 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Pdlim4P70271 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms