Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Fdft1P53798 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.93□□□□□ -1.46
Fdft1P53798 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Fdft1P53798 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Fdft1P53798 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Fdft1P53798 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Fdft1P53798 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Fdft1P53798 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.93□□□□□ -1.46
Fdft1P53798 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Fdft1P53798 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Fdft1P53798 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Fdft1P53798 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Fdft1P53798 Gm5832-201ENSMUST00000121704 1582 ntBASIC5.93□□□□□ -1.46
Fdft1P53798 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.92□□□□□ -1.46
Fdft1P53798 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.92□□□□□ -1.46
Fdft1P53798 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Fdft1P53798 Gm37370-201ENSMUST00000191996 1410 ntBASIC5.92□□□□□ -1.46
Fdft1P53798 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Fdft1P53798 Gm44676-201ENSMUST00000208520 3055 ntBASIC5.92□□□□□ -1.46
Fdft1P53798 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Fdft1P53798 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Fdft1P53798 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Fdft1P53798 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Fdft1P53798 Gm8501-201ENSMUST00000117684 432 ntBASIC5.92□□□□□ -1.46
Fdft1P53798 Gm16074-201ENSMUST00000119524 444 ntBASIC5.92□□□□□ -1.46
Fdft1P53798 Gm11485-201ENSMUST00000120048 1175 ntBASIC5.92□□□□□ -1.46
Fdft1P53798 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Fdft1P53798 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC5.92□□□□□ -1.46
Fdft1P53798 Snora47-201ENSMUST00000157483 138 ntBASIC5.92□□□□□ -1.46
Fdft1P53798 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC5.92□□□□□ -1.46
Fdft1P53798 Gm26607-201ENSMUST00000180661 867 ntBASIC5.92□□□□□ -1.46
Fdft1P53798 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.92□□□□□ -1.46
Fdft1P53798 Gm18352-201ENSMUST00000189113 902 ntBASIC5.92□□□□□ -1.46
Fdft1P53798 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC5.92□□□□□ -1.46
Fdft1P53798 Gm37774-201ENSMUST00000194401 245 ntBASIC5.92□□□□□ -1.46
Fdft1P53798 Gm43233-201ENSMUST00000200491 616 ntBASIC5.92□□□□□ -1.46
Fdft1P53798 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC5.92□□□□□ -1.46
Fdft1P53798 Gm5886-202ENSMUST00000203957 522 ntBASIC5.92□□□□□ -1.46
Fdft1P53798 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Fdft1P53798 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC5.92□□□□□ -1.46
Fdft1P53798 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC5.92□□□□□ -1.46
Fdft1P53798 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC5.92□□□□□ -1.46
Fdft1P53798 Gm9292-201ENSMUST00000222008 710 ntBASIC5.92□□□□□ -1.46
Fdft1P53798 CT485612.1-201ENSMUST00000222555 382 ntBASIC5.92□□□□□ -1.46
Fdft1P53798 AC164302.1-201ENSMUST00000227036 433 ntBASIC5.92□□□□□ -1.46
Fdft1P53798 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.92□□□□□ -1.46
Fdft1P53798 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Fdft1P53798 Gm5229-201ENSMUST00000039375 354 ntBASIC5.92□□□□□ -1.46
Fdft1P53798 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Fdft1P53798 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Fdft1P53798 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Fdft1P53798 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Fdft1P53798 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Fdft1P53798 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Fdft1P53798 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Fdft1P53798 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
Fdft1P53798 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.92□□□□□ -1.46
Fdft1P53798 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Fdft1P53798 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Fdft1P53798 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Fdft1P53798 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Fdft1P53798 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Fdft1P53798 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Fdft1P53798 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Fdft1P53798 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Fdft1P53798 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Fdft1P53798 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.91□□□□□ -1.46
Fdft1P53798 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Fdft1P53798 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Fdft1P53798 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Fdft1P53798 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Fdft1P53798 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Fdft1P53798 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC5.91□□□□□ -1.46
Fdft1P53798 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC5.91□□□□□ -1.46
Fdft1P53798 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
Fdft1P53798 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.91□□□□□ -1.46
Fdft1P53798 Gm25219-201ENSMUST00000157545 330 ntBASIC5.91□□□□□ -1.46
Fdft1P53798 Gm20480-201ENSMUST00000173953 250 ntBASIC5.91□□□□□ -1.46
Fdft1P53798 Gm29234-201ENSMUST00000187452 1262 ntBASIC5.91□□□□□ -1.46
Fdft1P53798 Gm28586-201ENSMUST00000189857 456 ntBASIC5.91□□□□□ -1.46
Fdft1P53798 Ighv1-83-201ENSMUST00000199643 351 ntBASIC5.91□□□□□ -1.46
Fdft1P53798 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC5.91□□□□□ -1.46
Fdft1P53798 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC5.91□□□□□ -1.46
Fdft1P53798 Gm4032-201ENSMUST00000210886 487 ntBASIC5.91□□□□□ -1.46
Fdft1P53798 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC5.91□□□□□ -1.46
Fdft1P53798 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC5.91□□□□□ -1.46
Fdft1P53798 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Fdft1P53798 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Fdft1P53798 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Fdft1P53798 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Fdft1P53798 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Fdft1P53798 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Fdft1P53798 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Fdft1P53798 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Fdft1P53798 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Fdft1P53798 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.91□□□□□ -1.46
Fdft1P53798 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Fdft1P53798 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Fdft1P53798 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
Fdft1P53798 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms