Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cux1P53564 Gm28554-202ENSMUST00000189175 484 ntBASIC9.13□□□□□ -0.95
Cux1P53564 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cux1P53564 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cux1P53564 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cux1P53564 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cux1P53564 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cux1P53564 Gm29213-202ENSMUST00000189703 484 ntBASIC9.13□□□□□ -0.95
Cux1P53564 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cux1P53564 Gm28851-202ENSMUST00000189757 484 ntBASIC9.13□□□□□ -0.95
Cux1P53564 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cux1P53564 Gm28461-201ENSMUST00000190023 484 ntBASIC9.13□□□□□ -0.95
Cux1P53564 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cux1P53564 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cux1P53564 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cux1P53564 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cux1P53564 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cux1P53564 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cux1P53564 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cux1P53564 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cux1P53564 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cux1P53564 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cux1P53564 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cux1P53564 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cux1P53564 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
Cux1P53564 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cux1P53564 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cux1P53564 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cux1P53564 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cux1P53564 Gm43973-201ENSMUST00000203562 210 ntBASIC9.13□□□□□ -0.95
Cux1P53564 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC9.13□□□□□ -0.95
Cux1P53564 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC9.13□□□□□ -0.95
Cux1P53564 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC9.13□□□□□ -0.95
Cux1P53564 AC131745.2-201ENSMUST00000225736 565 ntBASIC9.13□□□□□ -0.95
Cux1P53564 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Cux1P53564 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Cux1P53564 AC136019.1-201ENSMUST00000226503 1412 ntBASIC9.13□□□□□ -0.95
Cux1P53564 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cux1P53564 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC9.13□□□□□ -0.95
Cux1P53564 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
Cux1P53564 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Cux1P53564 CT025686.2-201ENSMUST00000227898 3315 ntBASIC9.12□□□□□ -0.95
Cux1P53564 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Cux1P53564 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC9.12□□□□□ -0.95
Cux1P53564 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cux1P53564 AC144733.2-201ENSMUST00000222552 2292 ntBASIC9.12□□□□□ -0.95
Cux1P53564 AC156636.2-201ENSMUST00000218845 4557 ntBASIC9.12□□□□□ -0.95
Cux1P53564 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cux1P53564 Gm14606-201ENSMUST00000117078 1155 ntBASIC9.12□□□□□ -0.95
Cux1P53564 Gm14520-201ENSMUST00000119258 387 ntBASIC9.12□□□□□ -0.95
Cux1P53564 Gm11990-201ENSMUST00000121505 897 ntBASIC9.12□□□□□ -0.95
Cux1P53564 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC9.12□□□□□ -0.95
Cux1P53564 Gm22132-201ENSMUST00000175316 100 ntBASIC9.12□□□□□ -0.95
Cux1P53564 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC9.12□□□□□ -0.95
Cux1P53564 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cux1P53564 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC9.12□□□□□ -0.95
Cux1P53564 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC9.12□□□□□ -0.95
Cux1P53564 Gm4548-201ENSMUST00000208487 509 ntBASIC9.12□□□□□ -0.95
Cux1P53564 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC9.12□□□□□ -0.95
Cux1P53564 CT025579.3-201ENSMUST00000224543 451 ntBASIC9.12□□□□□ -0.95
Cux1P53564 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cux1P53564 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cux1P53564 Gm28379-202ENSMUST00000187676 2896 ntBASIC9.12□□□□□ -0.95
Cux1P53564 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC9.12□□□□□ -0.95
Cux1P53564 AC122346.1-201ENSMUST00000225266 3732 ntBASIC9.12□□□□□ -0.95
Cux1P53564 Ankrd55-205ENSMUST00000223871 3209 ntBASIC9.12□□□□□ -0.95
Cux1P53564 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
Cux1P53564 Gm43857-201ENSMUST00000200343 3079 ntBASIC9.12□□□□□ -0.95
Cux1P53564 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cux1P53564 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Cux1P53564 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cux1P53564 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cux1P53564 Gm45562-201ENSMUST00000210015 1537 ntBASIC9.12□□□□□ -0.95
Cux1P53564 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cux1P53564 AC165080.3-201ENSMUST00000217162 3116 ntBASIC9.11□□□□□ -0.95
Cux1P53564 Gm25564-201ENSMUST00000104604 132 ntBASIC9.11□□□□□ -0.95
Cux1P53564 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cux1P53564 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Cux1P53564 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC9.11□□□□□ -0.95
Cux1P53564 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cux1P53564 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC9.11□□□□□ -0.95
Cux1P53564 Gm24767-201ENSMUST00000158509 95 ntBASIC9.11□□□□□ -0.95
Cux1P53564 Gm8826-201ENSMUST00000193161 948 ntBASIC9.11□□□□□ -0.95
Cux1P53564 Gm29755-201ENSMUST00000196976 948 ntBASIC9.11□□□□□ -0.95
Cux1P53564 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC9.11□□□□□ -0.95
Cux1P53564 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC9.11□□□□□ -0.95
Cux1P53564 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Cux1P53564 Gm9386-201ENSMUST00000095195 381 ntBASIC9.11□□□□□ -0.95
Cux1P53564 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cux1P53564 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cux1P53564 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Cux1P53564 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cux1P53564 Gm6011-201ENSMUST00000211736 1796 ntBASIC9.11□□□□□ -0.95
Cux1P53564 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cux1P53564 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC9.11□□□□□ -0.95
Cux1P53564 Gm42837-201ENSMUST00000197071 2829 ntBASIC9.11□□□□□ -0.95
Cux1P53564 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cux1P53564 CT009757.5-201ENSMUST00000221858 3425 ntBASIC9.11□□□□□ -0.95
Cux1P53564 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cux1P53564 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms