Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 AC129935.1-201ENSMUST00000226302 873 ntBASIC7.98□□□□□ -1.13
Rfx1P48377 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rfx1P48377 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Rfx1P48377 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Rfx1P48377 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rfx1P48377 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Rfx1P48377 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Rfx1P48377 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC7.98□□□□□ -1.13
Rfx1P48377 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Rfx1P48377 Gm24046-201ENSMUST00000083111 165 ntBASIC7.98□□□□□ -1.13
Rfx1P48377 n-R5s86-201ENSMUST00000083215 119 ntBASIC7.98□□□□□ -1.13
Rfx1P48377 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rfx1P48377 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Rfx1P48377 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Rfx1P48377 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC7.98□□□□□ -1.13
Rfx1P48377 AC154642.2-201ENSMUST00000223657 2485 ntBASIC7.98□□□□□ -1.13
Rfx1P48377 Gm43490-201ENSMUST00000197593 2652 ntBASIC7.98□□□□□ -1.13
Rfx1P48377 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Rfx1P48377 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Rfx1P48377 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Rfx1P48377 Gm20300-201ENSMUST00000214634 3440 ntBASIC7.98□□□□□ -1.13
Rfx1P48377 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rfx1P48377 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rfx1P48377 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rfx1P48377 AU020206-202ENSMUST00000206358 3009 ntBASIC7.97□□□□□ -1.13
Rfx1P48377 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Rfx1P48377 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Rfx1P48377 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Rfx1P48377 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Rfx1P48377 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC7.97□□□□□ -1.13
Rfx1P48377 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Rfx1P48377 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC7.97□□□□□ -1.13
Rfx1P48377 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Rfx1P48377 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Rfx1P48377 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Rfx1P48377 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Rfx1P48377 Gm14631-201ENSMUST00000119067 594 ntBASIC7.97□□□□□ -1.13
Rfx1P48377 Gm5943-201ENSMUST00000119458 459 ntBASIC7.97□□□□□ -1.13
Rfx1P48377 Gm5387-201ENSMUST00000119776 857 ntBASIC7.97□□□□□ -1.13
Rfx1P48377 Gm11338-201ENSMUST00000120086 1160 ntBASIC7.97□□□□□ -1.13
Rfx1P48377 Gm15538-201ENSMUST00000121410 313 ntBASIC7.97□□□□□ -1.13
Rfx1P48377 Gm23429-201ENSMUST00000122486 149 ntBASIC7.97□□□□□ -1.13
Rfx1P48377 BC064078-201ENSMUST00000122939 570 ntBASIC7.97□□□□□ -1.13
Rfx1P48377 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC7.97□□□□□ -1.13
Rfx1P48377 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Rfx1P48377 Gm6610-201ENSMUST00000186324 358 ntBASIC7.97□□□□□ -1.13
Rfx1P48377 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC7.97□□□□□ -1.13
Rfx1P48377 Gm6472-202ENSMUST00000187973 582 ntBASIC7.97□□□□□ -1.13
Rfx1P48377 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Rfx1P48377 Gm7804-202ENSMUST00000194187 854 ntBASIC7.97□□□□□ -1.13
Rfx1P48377 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC7.97□□□□□ -1.13
Rfx1P48377 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Rfx1P48377 Gm3103-201ENSMUST00000198073 752 ntBASIC7.97□□□□□ -1.13
Rfx1P48377 Gm17987-201ENSMUST00000206902 603 ntBASIC7.97□□□□□ -1.13
Rfx1P48377 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Rfx1P48377 Gm45912-201ENSMUST00000210646 543 ntBASIC7.97□□□□□ -1.13
Rfx1P48377 AC166263.1-201ENSMUST00000218586 238 ntBASIC7.97□□□□□ -1.13
Rfx1P48377 AC117769.2-201ENSMUST00000224612 469 ntBASIC7.97□□□□□ -1.13
Rfx1P48377 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Rfx1P48377 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Rfx1P48377 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Rfx1P48377 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Rfx1P48377 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Rfx1P48377 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Rfx1P48377 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Rfx1P48377 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC7.97□□□□□ -1.13
Rfx1P48377 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Rfx1P48377 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
Rfx1P48377 Gm45117-201ENSMUST00000207250 1774 ntBASIC7.97□□□□□ -1.13
Rfx1P48377 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Rfx1P48377 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Rfx1P48377 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC7.96□□□□□ -1.13
Rfx1P48377 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC7.96□□□□□ -1.13
Rfx1P48377 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Rfx1P48377 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Rfx1P48377 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Rfx1P48377 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Rfx1P48377 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Rfx1P48377 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Rfx1P48377 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Rfx1P48377 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Rfx1P48377 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Rfx1P48377 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC7.96□□□□□ -1.14
Rfx1P48377 Gm25725-201ENSMUST00000104528 130 ntBASIC7.96□□□□□ -1.14
Rfx1P48377 Gm2348-201ENSMUST00000108782 300 ntBASIC7.96□□□□□ -1.14
Rfx1P48377 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Rfx1P48377 Gm9429-201ENSMUST00000117804 868 ntBASIC7.96□□□□□ -1.14
Rfx1P48377 Gm15021-201ENSMUST00000117832 742 ntBASIC7.96□□□□□ -1.14
Rfx1P48377 Gm13459-201ENSMUST00000121558 646 ntBASIC7.96□□□□□ -1.14
Rfx1P48377 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Rfx1P48377 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Rfx1P48377 Snora81-201ENSMUST00000157310 178 ntBASIC7.96□□□□□ -1.14
Rfx1P48377 Gm25717-201ENSMUST00000158631 353 ntBASIC7.96□□□□□ -1.14
Rfx1P48377 Gm25598-201ENSMUST00000179031 107 ntBASIC7.96□□□□□ -1.14
Rfx1P48377 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Rfx1P48377 Mir8114-201ENSMUST00000183582 111 ntBASIC7.96□□□□□ -1.14
Rfx1P48377 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC7.96□□□□□ -1.14
Rfx1P48377 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC7.96□□□□□ -1.14
Rfx1P48377 Gm2221-201ENSMUST00000209342 418 ntBASIC7.96□□□□□ -1.14
Rfx1P48377 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC7.96□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms